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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
116.2
nTPM
GTEx:
116.2
nTPM
FANTOM5:
55.8
Scaled Tags Per Million
Pig:
28.7
nTPM
Mouse:
79.3
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
116.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 116.2
Samples: 105
Max nTPM: 205.5
Min nTPM: 48.6
Std nTPM: 26.2
Median nTPM:
218_1
71 years, female
205.5
321_1
62 years, female
166.4
6_1
73 years, female
163.5
389_1
86 years, female
163.4
237_1
82 years, male
159.8
447_1
81 years, male
157.7
2_1
77 years, female
156.8
394_1
75 years, female
154.7
322_1
76 years, male
149.7
319_1
81 years, male
148.9
375_1
74 years, female
148.7
425_1
59 years, female
146.4
173_1
67 years, male
145.7
384_1
83 years, male
145.0
163_1
78 years, male
142.2
246_1
77 years, male
141.2
35_1
74 years, female
140.8
406_1
79 years, male
140.0
347_1
72 years, male
139.1
377_1
82 years, female
138.6
189_1
76 years, male
138.3
307_1
66 years, female
137.8
99_1
64 years, male
136.9
42_1
85 years, male
136.8
293_1
68 years, female
136.7
350_1
84 years, female
132.8
352_1
62 years, male
132.5
266_1
85 years, male
131.5
355_1
70 years, female
131.3
172_1
72 years, female
130.9
335_1
73 years, female
130.9
229_1
69 years, female
128.8
126_1
63 years, male
128.6
405_1
91 years, male
128.6
318_1
68 years, male
128.0
379_1
60 years, male
127.8
316_1
62 years, male
127.7
356_1
87 years, female
127.6
386_1
76 years, male
127.4
404_1
82 years, female
126.4
376_1
75 years, female
125.7
354_1
81 years, female
125.4
468_1
89 years, male
125.2
317_1
60 years, male
125.1
495_1
57 years, female
124.3
251_1
78 years, male
122.9
480_1
63 years, male
122.5
292_1
71 years, male
121.2
137_1
83 years, male
118.2
153_1
70 years, female
118.1
177_1
74 years, male
118.0
526_1
61 years, male
116.7
217_1
76 years, male
115.0
349_1
83 years, male
114.4
503_1
68 years, male
114.2
353_1
82 years, female
114.0
291_1
76 years, male
113.1
4_1
88 years, female
113.0
311_1
78 years, male
112.7
117_1
61 years, male
112.1
320_1
89 years, female
112.1
348_1
84 years, male
111.9
115_1
83 years, male
110.4
243_1
75 years, male
109.8
517_1
88 years, male
108.9
41_1
94 years, female
107.4
286_1
68 years, female
106.2
254_1
77 years, female
105.7
499_1
55 years, female
105.1
295_1
61 years, female
105.0
120_1
70 years, female
104.3
324_1
76 years, male
104.1
9_1
66 years, female
103.5
265_1
87 years, male
102.6
518_1
75 years, female
101.3
17_1
71 years, male
100.9
351_1
91 years, male
100.8
452_1
88 years, female
100.6
139_1
64 years, female
99.4
119_1
70 years, female
98.6
264_1
73 years, female
97.7
313_1
79 years, female
97.6
162_1
79 years, female
96.5
396_1
62 years, male
95.4
145_1
84 years, male
94.5
308_1
70 years, female
92.6
414_1
84 years, female
90.1
142_1
61 years, female
88.5
415_1
77 years, female
88.3
18_1
88 years, male
87.5
81_1
67 years, male
86.9
314_1
67 years, male
85.3
506_1
65 years, male
83.5
466_1
57 years, female
83.1
109_1
81 years, female
82.0
315_1
62 years, female
80.0
89_1
63 years, male
79.5
288_1
66 years, female
79.2
32_1
67 years, male
77.7
43_1
64 years, female
76.3
490_1
67 years, female
68.5
149_1
88 years, male
66.6
491_1
89 years, female
62.1
413_1
59 years, female
61.4
501_1
88 years, male
48.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
