HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:11.1 nTPM
HPA Brain:19.7 nTPM
GTEx:11.1 nTPM
FANTOM5:29.0 Scaled Tags Per Million
Pig:24.3 nTPM
Mouse:30.9 nTPM
Allen mouse:6.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA072705
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.7
Sample id Sample description nTPM
Hippocampus
nTPM: 17.6
1911 Female, age 85, right hemisphere 30.5
1855 Male, age 76, left hemisphere 20.1
2529 Female, age 94, left hemisphere 15.7
1898 Male, age 80, left hemisphere 15.1
2148 Female, age 91, left hemisphere 14.1
2621 Female, age 67, right hemisphere 10.0
Dentate gyrus
nTPM: 13.3
2246 Female, age 85, both hemispheres 15.4
2010 Male, age 76, both hemispheres 14.4
2528 Male, age 74, both hemispheres 14.2
1927 Female, age 91, both hemispheres 13.6
2530 Female, age 94, left hemisphere 13.5
2531 Female, age 67, both hemispheres 8.9
Entorhinal gyrus
nTPM: 11.5
2764 Male, age 80, right hemisphere 14.2
1938 Female, age 85, left hemisphere 13.2
2686 Male, age 75, right hemisphere 12.9
2117 Female, age 91, right hemisphere 11.0
1787 Male, age 76, left hemisphere 9.2
2613 Female, age 94, left hemisphere 8.7
Hippocampus, CA1
nTPM: 19.1
2527 Male, age 74, both hemispheres 22.7
1873 Female, age 85, both hemispheres 22.5
2082 Female, age 91, right hemisphere 21.9
2749 Male, age 80, left hemisphere 20.9
2045 Male, age 76, both hemispheres 7.2
Hippocampus, CA2
nTPM: 17.8
2113 Female, age 91, right hemisphere 26.3
2437 Female, age 94, left hemisphere 23.6
2249 Male, age 74, both hemispheres 21.2
1940 Female, age 85, left hemisphere 16.4
1963 Male, age 80, left hemisphere 9.7
1892 Male, age 76, both hemispheres 9.6
Hippocampus, CA3
nTPM: 12.1
2137 Male, age 80, left hemisphere 21.9
1867 Male, age 76, both hemispheres 14.9
2861 Female, age 67, both hemispheres 11.2
1891 Female, age 85, both hemispheres 11.1
2436 Male, age 74, both hemispheres 8.5
2620 Female, age 94, left hemisphere 4.9
Parahippocampal cortex
nTPM: 19.7
2693 Female, age 94, both hemispheres 36.3
2245 Female, age 91, both hemispheres 32.5
2018 Male, age 76, both hemispheres 25.4
2532 Female, age 72, left hemisphere 20.7
1933 Female, age 85, both hemispheres 20.4
2622 Female, age 67, right hemisphere 18.4
2250 Female, age 67, right hemisphere 16.5
1990 Female, age 91, right hemisphere 10.2
2692 Male, age 74, both hemispheres 8.9
1850 Male, age 80, both hemispheres 7.8
Perirhinal gyrus
nTPM: 17.8
2521 Female, age 94, right hemisphere 25.9
2848 Male, age 76, right hemisphere 18.0
1847 Female, age 91, left hemisphere 17.2
1841 Female, age 85, right hemisphere 15.7
1794 Male, age 80, right hemisphere 12.2
Subiculum
nTPM: 13.8
2042 Male, age 76, both hemispheres 20.6
2729 Female, age 91, right hemisphere 16.9
1901 Male, age 80, both hemispheres 14.7
2619 Male, age 74, both hemispheres 12.6
1977 Female, age 85, both hemispheres 12.3
2438 Female, age 94, left hemisphere 5.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.1
Samples: 197

Max nTPM: 57.3
Min nTPM: 1.1
Std nTPM: 9.9
Median nTPM: 8.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 57.3
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 53.3
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 47.9
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 45.6
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 42.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 36.5
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 36.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 35.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 32.7
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 31.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 30.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.0
FF:10169-103B7 60 years, female 41.5
FF:10153-102I9 76 years, female 16.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.3
Pig sample Sample description nTPM
Subiculum
nTPM: 24.3
Samples: 4

Max nTPM: 30.8
Min nTPM: 15.0
Sample A Female 30.8
Sample B Female 21.8
Sample C Male 29.7
Sample D Male 15.0
Dorsal hippocampus
nTPM: 12.7
Samples: 4

Max nTPM: 17.0
Min nTPM: 8.6
Sample A Female 17.0
Sample B Female 15.0
Sample C Male 10.3
Sample D Male 8.6
Entorhinal cortex
nTPM: 24.2
Samples: 4

Max nTPM: 28.7
Min nTPM: 21.6
Sample A Female 24.6
Sample B Female 21.6
Sample C Male 28.7
Sample D Male 22.0
Ventral hippocampus
nTPM: 14.6
Samples: 4

Max nTPM: 20.6
Min nTPM: 6.8
Sample A Female 14.2
Sample B Female 16.7
Sample C Male 20.6
Sample D Male 6.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.8
Samples: 4

Max nTPM: 20.2
Min nTPM: 16.7
Sample A Male 16.7
Sample B Male 18.6
Sample C Female 19.5
Sample D Female 20.2
Hippocampal formation
nTPM: 30.9
Samples: 4

Max nTPM: 33.3
Min nTPM: 28.1
Sample A Male 28.1
Sample B Male 33.3
Sample C Female 31.0
Sample D Female 31.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.1
74724786 Antisense, RP_060220_04_B11, Mouse strain C57BL/6J (56 days, male) 6.8
69514458 Antisense, RP_050419_03_D04, Mouse strain C57BL/6J (56 days, male) 5.4

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