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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
76.7
nTPM
Monaco:
123.5
nTPM
Schmiedel:
97.3
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
76.7
HPA sample
nTPM
gdT-cell nTPM: 76.7
Samples: 6
Max nTPM: 98.6
Min nTPM: 55.3
P10809_1007
55.3
P10809_1022
80.7
P10809_1041
98.6
P10809_1060
61.4
P10809_1077
74.3
P10809_1098
89.8
MAIT T-cell nTPM: 67.9
Samples: 6
Max nTPM: 94.7
Min nTPM: 46.4
P10809_1006
46.4
P10809_1024
71.6
P10809_1043
73.9
P10809_1062
61.7
P10809_1083
58.9
P10809_1097
94.7
Memory CD4 T-cell nTPM: 61.6
Samples: 6
Max nTPM: 77.8
Min nTPM: 44.3
P10809_1014
44.3
P10809_1026
50.5
P10809_1045
77.8
P10809_1064
66.2
P10809_1086
75.8
P10809_1113
54.7
Memory CD8 T-cell nTPM: 70.9
Samples: 5
Max nTPM: 91.9
Min nTPM: 46.0
P10809_1012
46.0
P10809_1027
91.9
P10809_1046
72.5
P10809_1065
74.3
P10809_1111
69.9
Naive CD4 T-cell nTPM: 67.9
Samples: 6
Max nTPM: 98.0
Min nTPM: 40.7
P10809_1015
40.7
P10809_1030
74.8
P10809_1049
98.0
P10809_1068
73.9
P10809_1085
56.2
P10809_1112
63.7
Naive CD8 T-cell nTPM: 64.8
Samples: 6
Max nTPM: 77.5
Min nTPM: 41.1
P10809_1016
41.1
P10809_1031
73.8
P10809_1050
71.8
P10809_1069
77.5
P10809_1087
70.7
P10809_1110
53.7
T-reg nTPM: 75.3
Samples: 6
Max nTPM: 106.7
Min nTPM: 49.2
P10809_1018
49.2
P10809_1037
57.9
P10809_1056
106.7
P10809_1075
67.9
P10809_1094
70.3
P10809_1106
99.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
123.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 55.9
Samples: 4
Max nTPM: 67.1
Min nTPM: 45.1
RHH5202_R3573
56.7
RHH5230_R3602
45.1
RHH5259_R3631
54.8
RHH5288_R3660
67.1
Effector memory CD8 T-cell nTPM: 109.5
Samples: 4
Max nTPM: 139.2
Min nTPM: 79.9
RHH5203_R3574
122.7
RHH5231_R3603
139.2
RHH5260_R3632
96.0
RHH5289_R3661
79.9
MAIT T-cell nTPM: 101.3
Samples: 4
Max nTPM: 120.7
Min nTPM: 80.7
RHH5233_R3605
108.4
RHH5205_R3576
80.7
RHH5262_R3634
120.7
RHH5297_R3663
95.4
Memory CD4 T-cell TFH nTPM: 77.7
Samples: 4
Max nTPM: 102.2
Min nTPM: 45.9
RHH5300_R3666
81.4
RHH5236_R3608
102.2
RHH5265_R3637
81.4
RHH5208_R3579
45.9
Memory CD4 T-cell Th1 nTPM: 84.1
Samples: 4
Max nTPM: 94.6
Min nTPM: 75.2
RHH5210_R3581
84.4
RHH5302_R3668
94.6
RHH5238_R3610
75.2
RHH5267_R3639
82.1
Memory CD4 T-cell Th1/Th17 nTPM: 77.0
Samples: 4
Max nTPM: 122.9
Min nTPM: 40.7
RHH5303_R3669
62.4
RHH5211_R3582
122.9
RHH5239_R3611
40.7
RHH5268_R3640
81.8
Memory CD4 T-cell Th17 nTPM: 68.7
Samples: 4
Max nTPM: 104.7
Min nTPM: 52.3
RHH5304_R3670
62.5
RHH5212_R3583
104.7
RHH5240_R3612
52.3
RHH5269_R3641
55.2
Memory CD4 T-cell Th2 nTPM: 95.5
Samples: 4
Max nTPM: 109.6
Min nTPM: 84.2
RHH5305_R3671
99.5
RHH5213_R3584
88.7
RHH5241_R3613
84.2
RHH5270_R3642
109.6
Naive CD4 T-cell nTPM: 89.5
Samples: 4
Max nTPM: 117.8
Min nTPM: 67.0
RHH5306_R3672
92.9
RHH5214_R3585
117.8
RHH5242_R3614
80.2
RHH5271_R3643
67.0
Naive CD8 T-cell nTPM: 59.4
Samples: 4
Max nTPM: 95.5
Min nTPM: 35.7
RHH5201_R3572
35.7
RHH5229_R3601
45.4
RHH5258_R3630
95.5
RHH5287_R3659
60.9
Non-Vd2 gdTCR nTPM: 123.5
Samples: 4
Max nTPM: 155.3
Min nTPM: 83.3
RHH5235_R3607
83.3
RHH5264_R3636
155.3
RHH5207_R3578
114.9
RHH5299_R3665
140.5
T-reg nTPM: 84.4
Samples: 4
Max nTPM: 118.4
Min nTPM: 67.3
RHH5301_R3667
83.1
RHH5237_R3609
118.4
RHH5266_R3638
67.3
RHH5209_R3580
68.7
Terminal effector memory CD4 T-cell nTPM: 107.7
Samples: 2
Max nTPM: 112.4
Min nTPM: 103.0
RHH5243_R3615
103.0
RHH5272_R3644
112.4
Terminal effector memory CD8 T-cell nTPM: 115.6
Samples: 4
Max nTPM: 131.7
Min nTPM: 92.0
RHH5232_R3604
128.0
RHH5204_R3575
131.7
RHH5261_R3633
110.6
RHH5296_R3662
92.0
Vd2 gdTCR nTPM: 104.3
Samples: 4
Max nTPM: 129.9
Min nTPM: 81.3
RHH5234_R3606
111.0
RHH5206_R3577
129.9
RHH5263_R3635
81.3
RHH5298_R3664
94.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
