HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:16.3 nTPM
HPA Brain:16.8 nTPM
GTEx:16.3 nTPM
FANTOM5:30.9 Scaled Tags Per Million
Pig:41.4 nTPM
Mouse:12.5 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.8
Sample id Sample description nTPM
Hippocampus
nTPM: 14.9
1911 Female, age 85, right hemisphere 18.4
2148 Female, age 91, left hemisphere 16.6
2621 Female, age 67, right hemisphere 14.7
2529 Female, age 94, left hemisphere 14.6
1855 Male, age 76, left hemisphere 12.8
1898 Male, age 80, left hemisphere 12.2
Dentate gyrus
nTPM: 14.8
2246 Female, age 85, both hemispheres 16.9
2528 Male, age 74, both hemispheres 16.0
2531 Female, age 67, both hemispheres 15.6
1927 Female, age 91, both hemispheres 14.7
2530 Female, age 94, left hemisphere 14.3
2010 Male, age 76, both hemispheres 11.2
Entorhinal gyrus
nTPM: 16.7
2613 Female, age 94, left hemisphere 19.2
2764 Male, age 80, right hemisphere 18.8
2686 Male, age 75, right hemisphere 17.8
1787 Male, age 76, left hemisphere 16.2
2117 Female, age 91, right hemisphere 14.2
1938 Female, age 85, left hemisphere 13.9
Hippocampus, CA1
nTPM: 14.5
2082 Female, age 91, right hemisphere 17.8
2749 Male, age 80, left hemisphere 14.6
2045 Male, age 76, both hemispheres 14.5
1873 Female, age 85, both hemispheres 12.9
2527 Male, age 74, both hemispheres 12.5
Hippocampus, CA2
nTPM: 15.5
1940 Female, age 85, left hemisphere 17.7
2437 Female, age 94, left hemisphere 16.2
2113 Female, age 91, right hemisphere 16.1
1963 Male, age 80, left hemisphere 14.9
2249 Male, age 74, both hemispheres 14.7
1892 Male, age 76, both hemispheres 13.6
Hippocampus, CA3
nTPM: 15.9
2620 Female, age 94, left hemisphere 20.3
1891 Female, age 85, both hemispheres 17.6
2861 Female, age 67, both hemispheres 16.7
2137 Male, age 80, left hemisphere 15.6
1867 Male, age 76, both hemispheres 13.5
2436 Male, age 74, both hemispheres 11.9
Parahippocampal cortex
nTPM: 16.8
2693 Female, age 94, both hemispheres 19.2
2622 Female, age 67, right hemisphere 19.1
2692 Male, age 74, both hemispheres 18.4
2245 Female, age 91, both hemispheres 17.1
2532 Female, age 72, left hemisphere 16.5
1850 Male, age 80, both hemispheres 15.8
2018 Male, age 76, both hemispheres 15.8
1990 Female, age 91, right hemisphere 15.7
2250 Female, age 67, right hemisphere 15.6
1933 Female, age 85, both hemispheres 14.5
Perirhinal gyrus
nTPM: 16.1
2848 Male, age 76, right hemisphere 18.2
2521 Female, age 94, right hemisphere 16.2
1794 Male, age 80, right hemisphere 16.1
1841 Female, age 85, right hemisphere 16.0
1847 Female, age 91, left hemisphere 14.2
Subiculum
nTPM: 16.4
2042 Male, age 76, both hemispheres 18.3
1901 Male, age 80, both hemispheres 17.3
2729 Female, age 91, right hemisphere 16.4
2438 Female, age 94, left hemisphere 16.3
1977 Female, age 85, both hemispheres 15.4
2619 Male, age 74, both hemispheres 14.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.3
Samples: 197

Max nTPM: 40.1
Min nTPM: 6.9
Std nTPM: 4.3
Median nTPM: 15.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 40.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 28.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 27.8
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 26.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 25.1
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 24.7
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 24.1
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 23.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 23.6
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 23.5
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 23.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 30.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.9
FF:10153-102I9 76 years, female 33.9
FF:10169-103B7 60 years, female 28.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.4
Pig sample Sample description nTPM
Subiculum
nTPM: 36.4
Samples: 4

Max nTPM: 48.7
Min nTPM: 26.3
Sample A Female 48.7
Sample B Female 38.5
Sample C Male 26.3
Sample D Male 32.2
Dorsal hippocampus
nTPM: 39.7
Samples: 4

Max nTPM: 56.0
Min nTPM: 29.9
Sample A Female 56.0
Sample B Female 38.6
Sample C Male 34.1
Sample D Male 29.9
Entorhinal cortex
nTPM: 41.4
Samples: 4

Max nTPM: 53.8
Min nTPM: 32.6
Sample A Female 40.4
Sample B Female 53.8
Sample C Male 38.9
Sample D Male 32.6
Ventral hippocampus
nTPM: 36.9
Samples: 4

Max nTPM: 40.0
Min nTPM: 33.6
Sample A Female 39.8
Sample B Female 34.0
Sample C Male 40.0
Sample D Male 33.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.0
Samples: 4

Max nTPM: 12.8
Min nTPM: 10.7
Sample A Male 12.8
Sample B Male 12.5
Sample C Female 11.8
Sample D Female 10.7
Hippocampal formation
nTPM: 12.5
Samples: 4

Max nTPM: 13.6
Min nTPM: 10.7
Sample A Male 12.9
Sample B Male 13.6
Sample C Female 10.7
Sample D Female 12.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
80525705 Antisense, RP_071204_02_B10, Mouse strain C57BL/6J (56 days, male) 0.2

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