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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
65.0
nTPM
Monaco:
58.5
nTPM
Schmiedel:
18.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
65.0
HPA sample
nTPM
gdT-cell nTPM: 53.5
Samples: 6
Max nTPM: 66.1
Min nTPM: 39.5
P10809_1007
39.5
P10809_1022
59.8
P10809_1041
47.4
P10809_1060
56.2
P10809_1077
52.0
P10809_1098
66.1
MAIT T-cell nTPM: 48.2
Samples: 6
Max nTPM: 56.9
Min nTPM: 35.8
P10809_1006
39.7
P10809_1024
52.2
P10809_1043
54.8
P10809_1062
49.8
P10809_1083
35.8
P10809_1097
56.9
Memory CD4 T-cell nTPM: 47.2
Samples: 6
Max nTPM: 54.5
Min nTPM: 34.9
P10809_1014
34.9
P10809_1026
54.5
P10809_1045
47.5
P10809_1064
44.9
P10809_1086
48.5
P10809_1113
52.6
Memory CD8 T-cell nTPM: 52.8
Samples: 5
Max nTPM: 75.7
Min nTPM: 40.2
P10809_1012
40.2
P10809_1027
48.3
P10809_1046
57.8
P10809_1065
42.1
P10809_1111
75.7
Naive CD4 T-cell nTPM: 41.0
Samples: 6
Max nTPM: 50.4
Min nTPM: 22.3
P10809_1015
22.3
P10809_1030
36.8
P10809_1049
45.4
P10809_1068
50.4
P10809_1085
49.0
P10809_1112
41.8
Naive CD8 T-cell nTPM: 44.8
Samples: 6
Max nTPM: 58.3
Min nTPM: 28.1
P10809_1016
28.1
P10809_1031
39.2
P10809_1050
54.6
P10809_1069
58.3
P10809_1087
45.0
P10809_1110
43.7
T-reg nTPM: 65.0
Samples: 6
Max nTPM: 82.2
Min nTPM: 51.5
P10809_1018
51.5
P10809_1037
56.1
P10809_1056
80.3
P10809_1075
60.1
P10809_1094
82.2
P10809_1106
60.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
58.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 46.4
Samples: 4
Max nTPM: 52.6
Min nTPM: 39.4
RHH5202_R3573
52.6
RHH5230_R3602
47.9
RHH5259_R3631
39.4
RHH5288_R3660
45.5
Effector memory CD8 T-cell nTPM: 43.5
Samples: 4
Max nTPM: 46.6
Min nTPM: 38.6
RHH5203_R3574
45.4
RHH5231_R3603
38.6
RHH5260_R3632
43.3
RHH5289_R3661
46.6
MAIT T-cell nTPM: 37.7
Samples: 4
Max nTPM: 44.1
Min nTPM: 26.0
RHH5233_R3605
39.5
RHH5205_R3576
26.0
RHH5262_R3634
41.1
RHH5297_R3663
44.1
Memory CD4 T-cell TFH nTPM: 46.1
Samples: 4
Max nTPM: 58.9
Min nTPM: 32.7
RHH5300_R3666
32.7
RHH5236_R3608
54.7
RHH5265_R3637
38.2
RHH5208_R3579
58.9
Memory CD4 T-cell Th1 nTPM: 37.1
Samples: 4
Max nTPM: 53.4
Min nTPM: 21.1
RHH5210_R3581
43.0
RHH5302_R3668
53.4
RHH5238_R3610
21.1
RHH5267_R3639
30.8
Memory CD4 T-cell Th1/Th17 nTPM: 43.6
Samples: 4
Max nTPM: 54.3
Min nTPM: 35.9
RHH5303_R3669
54.3
RHH5211_R3582
43.3
RHH5239_R3611
40.8
RHH5268_R3640
35.9
Memory CD4 T-cell Th17 nTPM: 36.5
Samples: 4
Max nTPM: 51.9
Min nTPM: 25.5
RHH5304_R3670
32.0
RHH5212_R3583
51.9
RHH5240_R3612
36.5
RHH5269_R3641
25.5
Memory CD4 T-cell Th2 nTPM: 40.4
Samples: 4
Max nTPM: 48.7
Min nTPM: 27.1
RHH5305_R3671
44.9
RHH5213_R3584
40.8
RHH5241_R3613
48.7
RHH5270_R3642
27.1
Naive CD4 T-cell nTPM: 39.3
Samples: 4
Max nTPM: 44.8
Min nTPM: 35.9
RHH5306_R3672
44.8
RHH5214_R3585
40.4
RHH5242_R3614
36.1
RHH5271_R3643
35.9
Naive CD8 T-cell nTPM: 42.3
Samples: 4
Max nTPM: 47.6
Min nTPM: 38.3
RHH5201_R3572
39.6
RHH5229_R3601
43.8
RHH5258_R3630
47.6
RHH5287_R3659
38.3
Non-Vd2 gdTCR nTPM: 49.6
Samples: 4
Max nTPM: 63.7
Min nTPM: 38.9
RHH5235_R3607
38.9
RHH5264_R3636
52.7
RHH5207_R3578
43.0
RHH5299_R3665
63.7
T-reg nTPM: 37.8
Samples: 4
Max nTPM: 42.5
Min nTPM: 32.1
RHH5301_R3667
40.7
RHH5237_R3609
42.5
RHH5266_R3638
32.1
RHH5209_R3580
36.0
Terminal effector memory CD4 T-cell nTPM: 37.4
Samples: 2
Max nTPM: 39.3
Min nTPM: 35.4
RHH5243_R3615
39.3
RHH5272_R3644
35.4
Terminal effector memory CD8 T-cell nTPM: 58.5
Samples: 4
Max nTPM: 69.2
Min nTPM: 37.2
RHH5232_R3604
69.2
RHH5204_R3575
61.5
RHH5261_R3633
37.2
RHH5296_R3662
66.1
Vd2 gdTCR nTPM: 47.5
Samples: 4
Max nTPM: 59.8
Min nTPM: 36.9
RHH5234_R3606
36.9
RHH5206_R3577
46.3
RHH5263_R3635
46.8
RHH5298_R3664
59.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
