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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
93.4
nTPM
Monaco:
206.2
nTPM
Schmiedel:
205.3
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
93.4
HPA sample
nTPM
gdT-cell nTPM: 93.4
Samples: 6
Max nTPM: 116.3
Min nTPM: 75.0
P10809_1007
77.5
P10809_1022
116.3
P10809_1041
105.7
P10809_1060
75.0
P10809_1077
92.1
P10809_1098
93.6
MAIT T-cell nTPM: 88.6
Samples: 6
Max nTPM: 103.0
Min nTPM: 77.9
P10809_1006
80.5
P10809_1024
85.0
P10809_1043
103.0
P10809_1062
96.0
P10809_1083
77.9
P10809_1097
89.4
Memory CD4 T-cell nTPM: 72.7
Samples: 6
Max nTPM: 88.4
Min nTPM: 63.3
P10809_1014
64.4
P10809_1026
88.4
P10809_1045
63.3
P10809_1064
70.7
P10809_1086
71.3
P10809_1113
78.1
Memory CD8 T-cell nTPM: 86.7
Samples: 5
Max nTPM: 103.6
Min nTPM: 75.8
P10809_1012
82.3
P10809_1027
90.6
P10809_1046
103.6
P10809_1065
75.8
P10809_1111
81.2
Naive CD4 T-cell nTPM: 46.1
Samples: 6
Max nTPM: 54.2
Min nTPM: 36.2
P10809_1015
36.2
P10809_1030
41.2
P10809_1049
53.6
P10809_1068
42.3
P10809_1085
54.2
P10809_1112
49.3
Naive CD8 T-cell nTPM: 61.8
Samples: 6
Max nTPM: 77.7
Min nTPM: 42.3
P10809_1016
42.3
P10809_1031
70.4
P10809_1050
55.2
P10809_1069
77.7
P10809_1087
72.8
P10809_1110
52.1
T-reg nTPM: 92.3
Samples: 6
Max nTPM: 128.0
Min nTPM: 72.1
P10809_1018
103.5
P10809_1037
86.6
P10809_1056
89.8
P10809_1075
73.6
P10809_1094
128.0
P10809_1106
72.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
206.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 129.4
Samples: 4
Max nTPM: 141.0
Min nTPM: 120.4
RHH5202_R3573
134.2
RHH5230_R3602
141.0
RHH5259_R3631
122.1
RHH5288_R3660
120.4
Effector memory CD8 T-cell nTPM: 206.2
Samples: 4
Max nTPM: 239.5
Min nTPM: 143.5
RHH5203_R3574
239.5
RHH5231_R3603
143.5
RHH5260_R3632
207.0
RHH5289_R3661
234.6
MAIT T-cell nTPM: 185.3
Samples: 4
Max nTPM: 225.4
Min nTPM: 151.6
RHH5233_R3605
189.1
RHH5205_R3576
225.4
RHH5262_R3634
175.0
RHH5297_R3663
151.6
Memory CD4 T-cell TFH nTPM: 155.1
Samples: 4
Max nTPM: 172.3
Min nTPM: 146.7
RHH5300_R3666
148.9
RHH5236_R3608
172.3
RHH5265_R3637
152.4
RHH5208_R3579
146.7
Memory CD4 T-cell Th1 nTPM: 139.5
Samples: 4
Max nTPM: 147.6
Min nTPM: 129.5
RHH5210_R3581
133.2
RHH5302_R3668
129.5
RHH5238_R3610
147.6
RHH5267_R3639
147.6
Memory CD4 T-cell Th1/Th17 nTPM: 154.4
Samples: 4
Max nTPM: 191.4
Min nTPM: 107.8
RHH5303_R3669
191.4
RHH5211_R3582
172.1
RHH5239_R3611
107.8
RHH5268_R3640
146.1
Memory CD4 T-cell Th17 nTPM: 177.0
Samples: 4
Max nTPM: 191.5
Min nTPM: 166.7
RHH5304_R3670
166.7
RHH5212_R3583
179.9
RHH5240_R3612
191.5
RHH5269_R3641
169.8
Memory CD4 T-cell Th2 nTPM: 154.2
Samples: 4
Max nTPM: 170.3
Min nTPM: 146.2
RHH5305_R3671
146.2
RHH5213_R3584
170.3
RHH5241_R3613
154.0
RHH5270_R3642
146.4
Naive CD4 T-cell nTPM: 110.2
Samples: 4
Max nTPM: 129.5
Min nTPM: 99.1
RHH5306_R3672
112.0
RHH5214_R3585
99.1
RHH5242_R3614
100.3
RHH5271_R3643
129.5
Naive CD8 T-cell nTPM: 112.8
Samples: 4
Max nTPM: 127.7
Min nTPM: 101.6
RHH5201_R3572
127.7
RHH5229_R3601
105.0
RHH5258_R3630
116.8
RHH5287_R3659
101.6
Non-Vd2 gdTCR nTPM: 196.8
Samples: 4
Max nTPM: 216.9
Min nTPM: 179.6
RHH5235_R3607
179.6
RHH5264_R3636
197.9
RHH5207_R3578
216.9
RHH5299_R3665
192.6
T-reg nTPM: 141.7
Samples: 4
Max nTPM: 179.3
Min nTPM: 118.4
RHH5301_R3667
130.6
RHH5237_R3609
179.3
RHH5266_R3638
118.4
RHH5209_R3580
138.5
Terminal effector memory CD4 T-cell nTPM: 183.7
Samples: 2
Max nTPM: 208.1
Min nTPM: 159.3
RHH5243_R3615
208.1
RHH5272_R3644
159.3
Terminal effector memory CD8 T-cell nTPM: 197.6
Samples: 4
Max nTPM: 228.4
Min nTPM: 169.0
RHH5232_R3604
190.1
RHH5204_R3575
169.0
RHH5261_R3633
228.4
RHH5296_R3662
203.0
Vd2 gdTCR nTPM: 158.5
Samples: 4
Max nTPM: 194.1
Min nTPM: 115.2
RHH5234_R3606
153.7
RHH5206_R3577
194.1
RHH5263_R3635
171.1
RHH5298_R3664
115.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
