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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
83.8
nTPM
Monaco:
120.6
nTPM
Schmiedel:
85.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
83.8
HPA sample
nTPM
gdT-cell nTPM: 68.3
Samples: 6
Max nTPM: 82.2
Min nTPM: 50.1
P10809_1007
50.1
P10809_1022
82.2
P10809_1041
69.0
P10809_1060
65.5
P10809_1077
68.1
P10809_1098
75.0
MAIT T-cell nTPM: 77.9
Samples: 6
Max nTPM: 104.7
Min nTPM: 51.8
P10809_1006
51.8
P10809_1024
104.7
P10809_1043
80.8
P10809_1062
80.9
P10809_1083
88.1
P10809_1097
61.0
Memory CD4 T-cell nTPM: 73.8
Samples: 6
Max nTPM: 89.2
Min nTPM: 53.8
P10809_1014
53.8
P10809_1026
72.8
P10809_1045
89.2
P10809_1064
64.0
P10809_1086
85.7
P10809_1113
77.3
Memory CD8 T-cell nTPM: 83.8
Samples: 5
Max nTPM: 101.1
Min nTPM: 69.0
P10809_1012
69.0
P10809_1027
101.1
P10809_1046
96.0
P10809_1065
75.0
P10809_1111
78.0
Naive CD4 T-cell nTPM: 81.4
Samples: 6
Max nTPM: 105.7
Min nTPM: 47.3
P10809_1015
47.3
P10809_1030
99.1
P10809_1049
105.7
P10809_1068
77.4
P10809_1085
74.1
P10809_1112
84.8
Naive CD8 T-cell nTPM: 69.5
Samples: 6
Max nTPM: 84.7
Min nTPM: 54.2
P10809_1016
54.2
P10809_1031
58.5
P10809_1050
64.9
P10809_1069
84.7
P10809_1087
79.8
P10809_1110
74.6
T-reg nTPM: 75.0
Samples: 6
Max nTPM: 89.2
Min nTPM: 58.9
P10809_1018
58.9
P10809_1037
68.4
P10809_1056
83.8
P10809_1075
68.0
P10809_1094
89.2
P10809_1106
81.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
120.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 98.8
Samples: 4
Max nTPM: 121.8
Min nTPM: 80.9
RHH5202_R3573
121.8
RHH5230_R3602
80.9
RHH5259_R3631
94.0
RHH5288_R3660
98.6
Effector memory CD8 T-cell nTPM: 113.2
Samples: 4
Max nTPM: 143.7
Min nTPM: 90.9
RHH5203_R3574
104.7
RHH5231_R3603
90.9
RHH5260_R3632
113.5
RHH5289_R3661
143.7
MAIT T-cell nTPM: 118.5
Samples: 4
Max nTPM: 143.9
Min nTPM: 105.2
RHH5233_R3605
116.6
RHH5205_R3576
143.9
RHH5262_R3634
105.2
RHH5297_R3663
108.2
Memory CD4 T-cell TFH nTPM: 105.4
Samples: 4
Max nTPM: 124.3
Min nTPM: 91.9
RHH5300_R3666
91.9
RHH5236_R3608
103.6
RHH5265_R3637
101.9
RHH5208_R3579
124.3
Memory CD4 T-cell Th1 nTPM: 96.0
Samples: 4
Max nTPM: 128.8
Min nTPM: 63.6
RHH5210_R3581
128.8
RHH5302_R3668
92.7
RHH5238_R3610
63.6
RHH5267_R3639
98.9
Memory CD4 T-cell Th1/Th17 nTPM: 107.2
Samples: 4
Max nTPM: 119.4
Min nTPM: 81.2
RHH5303_R3669
118.5
RHH5211_R3582
119.4
RHH5239_R3611
81.2
RHH5268_R3640
109.5
Memory CD4 T-cell Th17 nTPM: 115.4
Samples: 4
Max nTPM: 139.6
Min nTPM: 94.2
RHH5304_R3670
112.2
RHH5212_R3583
115.7
RHH5240_R3612
139.6
RHH5269_R3641
94.2
Memory CD4 T-cell Th2 nTPM: 115.2
Samples: 4
Max nTPM: 152.4
Min nTPM: 100.3
RHH5305_R3671
105.9
RHH5213_R3584
152.4
RHH5241_R3613
102.0
RHH5270_R3642
100.3
Naive CD4 T-cell nTPM: 106.3
Samples: 4
Max nTPM: 120.6
Min nTPM: 91.8
RHH5306_R3672
91.8
RHH5214_R3585
113.2
RHH5242_R3614
99.4
RHH5271_R3643
120.6
Naive CD8 T-cell nTPM: 120.6
Samples: 4
Max nTPM: 154.2
Min nTPM: 79.6
RHH5201_R3572
154.2
RHH5229_R3601
79.6
RHH5258_R3630
120.2
RHH5287_R3659
128.5
Non-Vd2 gdTCR nTPM: 103.8
Samples: 4
Max nTPM: 144.5
Min nTPM: 79.6
RHH5235_R3607
99.9
RHH5264_R3636
144.5
RHH5207_R3578
91.3
RHH5299_R3665
79.6
T-reg nTPM: 108.5
Samples: 4
Max nTPM: 127.9
Min nTPM: 95.7
RHH5301_R3667
97.2
RHH5237_R3609
127.9
RHH5266_R3638
95.7
RHH5209_R3580
113.3
Terminal effector memory CD4 T-cell nTPM: 92.0
Samples: 2
Max nTPM: 97.5
Min nTPM: 86.5
RHH5243_R3615
97.5
RHH5272_R3644
86.5
Terminal effector memory CD8 T-cell nTPM: 104.9
Samples: 4
Max nTPM: 110.3
Min nTPM: 100.5
RHH5232_R3604
110.3
RHH5204_R3575
105.8
RHH5261_R3633
103.1
RHH5296_R3662
100.5
Vd2 gdTCR nTPM: 112.1
Samples: 4
Max nTPM: 139.1
Min nTPM: 87.4
RHH5234_R3606
97.1
RHH5206_R3577
139.1
RHH5263_R3635
124.6
RHH5298_R3664
87.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
