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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
27.0
nTPM
Monaco:
127.5
nTPM
Schmiedel:
77.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
27.0
HPA sample
nTPM
gdT-cell nTPM: 17.9
Samples: 6
Max nTPM: 29.2
Min nTPM: 11.9
P10809_1007
29.2
P10809_1022
16.3
P10809_1041
14.9
P10809_1060
11.9
P10809_1077
13.6
P10809_1098
21.4
MAIT T-cell nTPM: 21.2
Samples: 6
Max nTPM: 44.3
Min nTPM: 8.3
P10809_1006
44.3
P10809_1024
8.3
P10809_1043
21.2
P10809_1062
13.2
P10809_1083
8.3
P10809_1097
31.9
Memory CD4 T-cell nTPM: 25.3
Samples: 6
Max nTPM: 48.4
Min nTPM: 11.1
P10809_1014
48.4
P10809_1026
20.0
P10809_1045
35.7
P10809_1064
22.2
P10809_1086
14.2
P10809_1113
11.1
Memory CD8 T-cell nTPM: 27.0
Samples: 5
Max nTPM: 48.9
Min nTPM: 14.0
P10809_1012
48.9
P10809_1027
14.0
P10809_1046
32.8
P10809_1065
20.0
P10809_1111
19.5
Naive CD4 T-cell nTPM: 23.4
Samples: 6
Max nTPM: 43.1
Min nTPM: 11.6
P10809_1015
43.1
P10809_1030
21.4
P10809_1049
25.4
P10809_1068
20.6
P10809_1085
11.6
P10809_1112
18.4
Naive CD8 T-cell nTPM: 20.8
Samples: 6
Max nTPM: 27.9
Min nTPM: 5.9
P10809_1016
27.4
P10809_1031
27.9
P10809_1050
15.6
P10809_1069
20.6
P10809_1087
5.9
P10809_1110
27.4
T-reg nTPM: 17.7
Samples: 6
Max nTPM: 27.0
Min nTPM: 5.8
P10809_1018
24.6
P10809_1037
8.6
P10809_1056
27.0
P10809_1075
25.0
P10809_1094
5.8
P10809_1106
15.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
127.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 101.7
Samples: 4
Max nTPM: 193.2
Min nTPM: 49.0
RHH5202_R3573
55.9
RHH5230_R3602
193.2
RHH5259_R3631
108.7
RHH5288_R3660
49.0
Effector memory CD8 T-cell nTPM: 73.5
Samples: 4
Max nTPM: 131.5
Min nTPM: 21.5
RHH5203_R3574
27.5
RHH5231_R3603
113.6
RHH5260_R3632
131.5
RHH5289_R3661
21.5
MAIT T-cell nTPM: 99.7
Samples: 4
Max nTPM: 144.2
Min nTPM: 71.4
RHH5233_R3605
71.4
RHH5205_R3576
93.8
RHH5262_R3634
144.2
RHH5297_R3663
89.4
Memory CD4 T-cell TFH nTPM: 90.3
Samples: 4
Max nTPM: 148.6
Min nTPM: 25.5
RHH5300_R3666
110.6
RHH5236_R3608
148.6
RHH5265_R3637
76.4
RHH5208_R3579
25.5
Memory CD4 T-cell Th1 nTPM: 106.3
Samples: 4
Max nTPM: 156.7
Min nTPM: 61.3
RHH5210_R3581
62.1
RHH5302_R3668
61.3
RHH5238_R3610
145.2
RHH5267_R3639
156.7
Memory CD4 T-cell Th1/Th17 nTPM: 115.7
Samples: 4
Max nTPM: 145.9
Min nTPM: 64.3
RHH5303_R3669
64.3
RHH5211_R3582
130.7
RHH5239_R3611
121.8
RHH5268_R3640
145.9
Memory CD4 T-cell Th17 nTPM: 107.4
Samples: 4
Max nTPM: 155.5
Min nTPM: 61.9
RHH5304_R3670
61.9
RHH5212_R3583
155.5
RHH5240_R3612
81.6
RHH5269_R3641
130.5
Memory CD4 T-cell Th2 nTPM: 103.3
Samples: 4
Max nTPM: 137.5
Min nTPM: 50.0
RHH5305_R3671
103.1
RHH5213_R3584
137.5
RHH5241_R3613
50.0
RHH5270_R3642
122.6
Naive CD4 T-cell nTPM: 127.5
Samples: 4
Max nTPM: 151.7
Min nTPM: 97.2
RHH5306_R3672
133.4
RHH5214_R3585
127.6
RHH5242_R3614
97.2
RHH5271_R3643
151.7
Naive CD8 T-cell nTPM: 93.0
Samples: 4
Max nTPM: 122.5
Min nTPM: 23.0
RHH5201_R3572
23.0
RHH5229_R3601
122.5
RHH5258_R3630
122.4
RHH5287_R3659
104.0
Non-Vd2 gdTCR nTPM: 79.6
Samples: 4
Max nTPM: 137.0
Min nTPM: 36.0
RHH5235_R3607
137.0
RHH5264_R3636
43.5
RHH5207_R3578
36.0
RHH5299_R3665
101.9
T-reg nTPM: 116.4
Samples: 4
Max nTPM: 148.4
Min nTPM: 74.5
RHH5301_R3667
74.5
RHH5237_R3609
101.3
RHH5266_R3638
148.4
RHH5209_R3580
141.4
Terminal effector memory CD4 T-cell nTPM: 96.3
Samples: 2
Max nTPM: 136.9
Min nTPM: 55.7
RHH5243_R3615
136.9
RHH5272_R3644
55.7
Terminal effector memory CD8 T-cell nTPM: 75.7
Samples: 4
Max nTPM: 124.8
Min nTPM: 53.3
RHH5232_R3604
66.3
RHH5204_R3575
58.2
RHH5261_R3633
124.8
RHH5296_R3662
53.3
Vd2 gdTCR nTPM: 97.4
Samples: 4
Max nTPM: 109.2
Min nTPM: 63.9
RHH5234_R3606
107.9
RHH5206_R3577
63.9
RHH5263_R3635
109.2
RHH5298_R3664
108.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
