We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
95.4
nTPM
Monaco:
57.9
nTPM
Schmiedel:
106.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
95.4
HPA sample
nTPM
gdT-cell nTPM: 66.7
Samples: 6
Max nTPM: 86.6
Min nTPM: 27.1
P10809_1007
71.6
P10809_1022
66.7
P10809_1041
86.6
P10809_1060
27.1
P10809_1077
76.8
P10809_1098
71.3
MAIT T-cell nTPM: 47.9
Samples: 6
Max nTPM: 77.3
Min nTPM: 32.7
P10809_1006
40.2
P10809_1024
35.7
P10809_1043
56.9
P10809_1062
32.7
P10809_1083
44.3
P10809_1097
77.3
Memory CD4 T-cell nTPM: 69.9
Samples: 6
Max nTPM: 97.7
Min nTPM: 28.9
P10809_1014
68.7
P10809_1026
97.7
P10809_1045
95.8
P10809_1064
81.1
P10809_1086
46.9
P10809_1113
28.9
Memory CD8 T-cell nTPM: 74.2
Samples: 5
Max nTPM: 105.7
Min nTPM: 39.8
P10809_1012
88.1
P10809_1027
39.8
P10809_1046
105.7
P10809_1065
69.2
P10809_1111
68.3
Naive CD4 T-cell nTPM: 62.2
Samples: 6
Max nTPM: 139.8
Min nTPM: 39.1
P10809_1015
45.6
P10809_1030
54.5
P10809_1049
139.8
P10809_1068
39.1
P10809_1085
53.4
P10809_1112
41.0
Naive CD8 T-cell nTPM: 54.3
Samples: 6
Max nTPM: 71.7
Min nTPM: 32.7
P10809_1016
33.9
P10809_1031
69.0
P10809_1050
65.1
P10809_1069
71.7
P10809_1087
32.7
P10809_1110
53.4
T-reg nTPM: 95.4
Samples: 6
Max nTPM: 173.5
Min nTPM: 33.4
P10809_1018
64.9
P10809_1037
135.1
P10809_1056
173.5
P10809_1075
86.0
P10809_1094
33.4
P10809_1106
79.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
57.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 37.0
Samples: 4
Max nTPM: 54.9
Min nTPM: 25.0
RHH5202_R3573
25.0
RHH5230_R3602
54.9
RHH5259_R3631
38.2
RHH5288_R3660
30.0
Effector memory CD8 T-cell nTPM: 58.0
Samples: 4
Max nTPM: 88.9
Min nTPM: 18.4
RHH5203_R3574
45.4
RHH5231_R3603
88.9
RHH5260_R3632
79.1
RHH5289_R3661
18.4
MAIT T-cell nTPM: 35.5
Samples: 4
Max nTPM: 57.9
Min nTPM: 21.1
RHH5233_R3605
32.8
RHH5205_R3576
21.1
RHH5262_R3634
57.9
RHH5297_R3663
30.2
Memory CD4 T-cell TFH nTPM: 43.8
Samples: 4
Max nTPM: 78.9
Min nTPM: 21.8
RHH5300_R3666
45.4
RHH5236_R3608
78.9
RHH5265_R3637
29.0
RHH5208_R3579
21.8
Memory CD4 T-cell Th1 nTPM: 47.7
Samples: 4
Max nTPM: 79.7
Min nTPM: 33.4
RHH5210_R3581
39.5
RHH5302_R3668
38.3
RHH5238_R3610
33.4
RHH5267_R3639
79.7
Memory CD4 T-cell Th1/Th17 nTPM: 35.2
Samples: 4
Max nTPM: 65.2
Min nTPM: 16.1
RHH5303_R3669
22.2
RHH5211_R3582
37.3
RHH5239_R3611
16.1
RHH5268_R3640
65.2
Memory CD4 T-cell Th17 nTPM: 39.2
Samples: 4
Max nTPM: 65.1
Min nTPM: 13.9
RHH5304_R3670
26.2
RHH5212_R3583
65.1
RHH5240_R3612
13.9
RHH5269_R3641
51.7
Memory CD4 T-cell Th2 nTPM: 49.2
Samples: 4
Max nTPM: 86.9
Min nTPM: 21.8
RHH5305_R3671
39.4
RHH5213_R3584
48.5
RHH5241_R3613
21.8
RHH5270_R3642
86.9
Naive CD4 T-cell nTPM: 37.3
Samples: 4
Max nTPM: 53.9
Min nTPM: 21.4
RHH5306_R3672
45.0
RHH5214_R3585
53.9
RHH5242_R3614
21.4
RHH5271_R3643
28.8
Naive CD8 T-cell nTPM: 30.2
Samples: 4
Max nTPM: 48.3
Min nTPM: 8.2
RHH5201_R3572
8.2
RHH5229_R3601
33.9
RHH5258_R3630
48.3
RHH5287_R3659
30.4
Non-Vd2 gdTCR nTPM: 45.4
Samples: 4
Max nTPM: 64.3
Min nTPM: 34.7
RHH5235_R3607
46.2
RHH5264_R3636
36.3
RHH5207_R3578
34.7
RHH5299_R3665
64.3
T-reg nTPM: 45.7
Samples: 4
Max nTPM: 58.7
Min nTPM: 33.6
RHH5301_R3667
45.5
RHH5237_R3609
58.7
RHH5266_R3638
45.1
RHH5209_R3580
33.6
Terminal effector memory CD4 T-cell nTPM: 54.9
Samples: 2
Max nTPM: 66.7
Min nTPM: 43.1
RHH5243_R3615
66.7
RHH5272_R3644
43.1
Terminal effector memory CD8 T-cell nTPM: 48.8
Samples: 4
Max nTPM: 76.0
Min nTPM: 22.1
RHH5232_R3604
43.5
RHH5204_R3575
53.5
RHH5261_R3633
76.0
RHH5296_R3662
22.1
Vd2 gdTCR nTPM: 44.1
Samples: 4
Max nTPM: 59.8
Min nTPM: 30.4
RHH5234_R3606
59.8
RHH5206_R3577
50.9
RHH5263_R3635
35.2
RHH5298_R3664
30.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
