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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
34.5
nTPM
Monaco:
16.1
nTPM
Schmiedel:
85.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
34.5
HPA sample
nTPM
gdT-cell nTPM: 23.6
Samples: 6
Max nTPM: 26.2
Min nTPM: 20.3
P10809_1007
20.8
P10809_1022
23.6
P10809_1041
25.2
P10809_1060
20.3
P10809_1077
25.4
P10809_1098
26.2
MAIT T-cell nTPM: 32.4
Samples: 6
Max nTPM: 45.6
Min nTPM: 21.3
P10809_1006
22.8
P10809_1024
40.1
P10809_1043
21.3
P10809_1062
25.0
P10809_1083
39.3
P10809_1097
45.6
Memory CD4 T-cell nTPM: 31.3
Samples: 6
Max nTPM: 35.9
Min nTPM: 25.0
P10809_1014
25.0
P10809_1026
33.7
P10809_1045
33.1
P10809_1064
25.1
P10809_1086
35.1
P10809_1113
35.9
Memory CD8 T-cell nTPM: 29.0
Samples: 5
Max nTPM: 37.0
Min nTPM: 22.1
P10809_1012
22.1
P10809_1027
32.6
P10809_1046
27.0
P10809_1065
26.3
P10809_1111
37.0
Naive CD4 T-cell nTPM: 29.8
Samples: 6
Max nTPM: 36.1
Min nTPM: 24.0
P10809_1015
25.2
P10809_1030
33.9
P10809_1049
30.9
P10809_1068
24.0
P10809_1085
36.1
P10809_1112
28.6
Naive CD8 T-cell nTPM: 30.8
Samples: 6
Max nTPM: 37.9
Min nTPM: 22.4
P10809_1016
22.4
P10809_1031
37.9
P10809_1050
28.1
P10809_1069
27.6
P10809_1087
36.5
P10809_1110
32.3
T-reg nTPM: 34.5
Samples: 6
Max nTPM: 53.2
Min nTPM: 16.7
P10809_1018
24.4
P10809_1037
48.7
P10809_1056
16.7
P10809_1075
40.1
P10809_1094
23.8
P10809_1106
53.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
16.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 12.7
Samples: 4
Max nTPM: 20.1
Min nTPM: 9.6
RHH5202_R3573
9.6
RHH5230_R3602
10.6
RHH5259_R3631
10.3
RHH5288_R3660
20.1
Effector memory CD8 T-cell nTPM: 12.3
Samples: 4
Max nTPM: 21.2
Min nTPM: 3.9
RHH5203_R3574
3.9
RHH5231_R3603
21.2
RHH5260_R3632
10.7
RHH5289_R3661
13.4
MAIT T-cell nTPM: 9.7
Samples: 4
Max nTPM: 13.8
Min nTPM: 5.3
RHH5233_R3605
13.1
RHH5205_R3576
6.7
RHH5262_R3634
5.3
RHH5297_R3663
13.8
Memory CD4 T-cell TFH nTPM: 9.1
Samples: 4
Max nTPM: 10.9
Min nTPM: 7.4
RHH5300_R3666
7.4
RHH5236_R3608
9.1
RHH5265_R3637
10.9
RHH5208_R3579
8.9
Memory CD4 T-cell Th1 nTPM: 12.3
Samples: 4
Max nTPM: 17.1
Min nTPM: 8.1
RHH5210_R3581
15.7
RHH5302_R3668
17.1
RHH5238_R3610
8.3
RHH5267_R3639
8.1
Memory CD4 T-cell Th1/Th17 nTPM: 10.7
Samples: 4
Max nTPM: 13.2
Min nTPM: 6.7
RHH5303_R3669
13.2
RHH5211_R3582
12.0
RHH5239_R3611
6.7
RHH5268_R3640
10.9
Memory CD4 T-cell Th17 nTPM: 10.1
Samples: 4
Max nTPM: 12.9
Min nTPM: 7.8
RHH5304_R3670
9.4
RHH5212_R3583
10.4
RHH5240_R3612
7.8
RHH5269_R3641
12.9
Memory CD4 T-cell Th2 nTPM: 11.0
Samples: 4
Max nTPM: 15.3
Min nTPM: 8.4
RHH5305_R3671
15.3
RHH5213_R3584
8.9
RHH5241_R3613
8.4
RHH5270_R3642
11.3
Naive CD4 T-cell nTPM: 15.0
Samples: 4
Max nTPM: 18.3
Min nTPM: 11.6
RHH5306_R3672
18.3
RHH5214_R3585
15.2
RHH5242_R3614
11.6
RHH5271_R3643
14.9
Naive CD8 T-cell nTPM: 16.1
Samples: 4
Max nTPM: 21.3
Min nTPM: 10.4
RHH5201_R3572
21.3
RHH5229_R3601
16.4
RHH5258_R3630
10.4
RHH5287_R3659
16.3
Non-Vd2 gdTCR nTPM: 12.5
Samples: 4
Max nTPM: 17.0
Min nTPM: 7.8
RHH5235_R3607
7.8
RHH5264_R3636
15.1
RHH5207_R3578
10.2
RHH5299_R3665
17.0
T-reg nTPM: 13.5
Samples: 4
Max nTPM: 16.6
Min nTPM: 7.5
RHH5301_R3667
13.9
RHH5237_R3609
16.6
RHH5266_R3638
7.5
RHH5209_R3580
16.0
Terminal effector memory CD4 T-cell nTPM: 8.1
Samples: 2
Max nTPM: 10.4
Min nTPM: 5.7
RHH5243_R3615
5.7
RHH5272_R3644
10.4
Terminal effector memory CD8 T-cell nTPM: 13.5
Samples: 4
Max nTPM: 22.8
Min nTPM: 7.5
RHH5232_R3604
7.6
RHH5204_R3575
22.8
RHH5261_R3633
7.5
RHH5296_R3662
16.1
Vd2 gdTCR nTPM: 14.8
Samples: 4
Max nTPM: 16.3
Min nTPM: 12.4
RHH5234_R3606
12.4
RHH5206_R3577
16.3
RHH5263_R3635
15.6
RHH5298_R3664
14.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
