HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:189.8 nTPM
HPA Brain:133.8 nTPM
GTEx:189.8 nTPM
FANTOM5:398.0 Scaled Tags Per Million
Pig:40.1 nTPM
Mouse:22.0 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011352Antibody CAB012273
Glial cells MediumMedium
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 133.8
Sample id Sample description nTPM
Hippocampus
nTPM: 120.3
1898 Male, age 80, left hemisphere 160.3
1855 Male, age 76, left hemisphere 145.1
1911 Female, age 85, right hemisphere 115.2
2529 Female, age 94, left hemisphere 110.3
2621 Female, age 67, right hemisphere 107.4
2148 Female, age 91, left hemisphere 83.3
Dentate gyrus
nTPM: 123.2
2010 Male, age 76, both hemispheres 173.3
2530 Female, age 94, left hemisphere 162.9
1927 Female, age 91, both hemispheres 137.8
2246 Female, age 85, both hemispheres 103.4
2531 Female, age 67, both hemispheres 82.0
2528 Male, age 74, both hemispheres 79.6
Entorhinal gyrus
nTPM: 101.1
1938 Female, age 85, left hemisphere 116.5
1787 Male, age 76, left hemisphere 109.3
2764 Male, age 80, right hemisphere 109.0
2686 Male, age 75, right hemisphere 102.8
2117 Female, age 91, right hemisphere 93.4
2613 Female, age 94, left hemisphere 75.3
Hippocampus, CA1
nTPM: 133.8
2749 Male, age 80, left hemisphere 197.2
1873 Female, age 85, both hemispheres 155.0
2045 Male, age 76, both hemispheres 124.1
2082 Female, age 91, right hemisphere 100.2
2527 Male, age 74, both hemispheres 92.6
Hippocampus, CA2
nTPM: 125.9
1892 Male, age 76, both hemispheres 195.7
1963 Male, age 80, left hemisphere 151.7
2437 Female, age 94, left hemisphere 111.3
2249 Male, age 74, both hemispheres 103.3
1940 Female, age 85, left hemisphere 98.2
2113 Female, age 91, right hemisphere 95.1
Hippocampus, CA3
nTPM: 111.9
1867 Male, age 76, both hemispheres 173.5
2137 Male, age 80, left hemisphere 157.8
1891 Female, age 85, both hemispheres 109.6
2436 Male, age 74, both hemispheres 96.8
2861 Female, age 67, both hemispheres 73.4
2620 Female, age 94, left hemisphere 60.5
Parahippocampal cortex
nTPM: 103.6
2018 Male, age 76, both hemispheres 135.5
1850 Male, age 80, both hemispheres 127.9
2245 Female, age 91, both hemispheres 119.5
1933 Female, age 85, both hemispheres 113.9
1990 Female, age 91, right hemisphere 104.4
2532 Female, age 72, left hemisphere 99.4
2692 Male, age 74, both hemispheres 93.1
2250 Female, age 67, right hemisphere 92.6
2622 Female, age 67, right hemisphere 82.3
2693 Female, age 94, both hemispheres 67.0
Perirhinal gyrus
nTPM: 120.0
1847 Female, age 91, left hemisphere 158.8
1841 Female, age 85, right hemisphere 139.0
1794 Male, age 80, right hemisphere 125.7
2848 Male, age 76, right hemisphere 99.9
2521 Female, age 94, right hemisphere 76.8
Subiculum
nTPM: 118.3
2042 Male, age 76, both hemispheres 161.5
2438 Female, age 94, left hemisphere 136.1
1901 Male, age 80, both hemispheres 126.2
1977 Female, age 85, both hemispheres 116.3
2729 Female, age 91, right hemisphere 89.9
2619 Male, age 74, both hemispheres 80.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 189.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 189.8
Samples: 197

Max nTPM: 353.6
Min nTPM: 101.8
Std nTPM: 49.7
Median nTPM: 184.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 353.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 329.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 318.6
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 305.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 297.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 289.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 288.7
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 287.3
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 284.2
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 275.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 272.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 398.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 398.0
FF:10169-103B7 60 years, female 533.8
FF:10153-102I9 76 years, female 262.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 40.1
Pig sample Sample description nTPM
Subiculum
nTPM: 31.4
Samples: 4

Max nTPM: 36.3
Min nTPM: 28.7
Sample A Female 36.3
Sample B Female 31.2
Sample C Male 29.3
Sample D Male 28.7
Dorsal hippocampus
nTPM: 40.1
Samples: 4

Max nTPM: 52.2
Min nTPM: 31.4
Sample A Female 52.2
Sample B Female 39.1
Sample C Male 37.7
Sample D Male 31.4
Entorhinal cortex
nTPM: 28.8
Samples: 4

Max nTPM: 31.5
Min nTPM: 26.0
Sample A Female 29.5
Sample B Female 31.5
Sample C Male 28.0
Sample D Male 26.0
Ventral hippocampus
nTPM: 38.2
Samples: 4

Max nTPM: 43.3
Min nTPM: 28.7
Sample A Female 43.2
Sample B Female 28.7
Sample C Male 43.3
Sample D Male 37.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.6
Samples: 4

Max nTPM: 19.8
Min nTPM: 15.5
Sample A Male 19.8
Sample B Male 16.4
Sample C Female 15.5
Sample D Female 18.7
Hippocampal formation
nTPM: 22.0
Samples: 4

Max nTPM: 24.8
Min nTPM: 20.3
Sample A Male 21.7
Sample B Male 21.2
Sample C Female 24.8
Sample D Female 20.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
75990507 Antisense, RP_060608_01_C09, Mouse strain C57BL/6J (56 days, male) 0.4

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