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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
96.0
nTPM
Monaco:
503.2
nTPM
Schmiedel:
397.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
96.0
HPA sample
nTPM
gdT-cell nTPM: 54.0
Samples: 6
Max nTPM: 66.0
Min nTPM: 43.5
P10809_1007
44.7
P10809_1022
58.7
P10809_1041
43.5
P10809_1060
51.8
P10809_1077
59.2
P10809_1098
66.0
MAIT T-cell nTPM: 96.0
Samples: 6
Max nTPM: 125.1
Min nTPM: 71.2
P10809_1006
125.1
P10809_1024
112.8
P10809_1043
71.2
P10809_1062
92.0
P10809_1083
97.2
P10809_1097
77.9
Memory CD4 T-cell nTPM: 49.7
Samples: 6
Max nTPM: 63.5
Min nTPM: 39.4
P10809_1014
63.5
P10809_1026
43.8
P10809_1045
39.7
P10809_1064
39.4
P10809_1086
57.0
P10809_1113
54.9
Memory CD8 T-cell nTPM: 59.7
Samples: 5
Max nTPM: 74.7
Min nTPM: 43.0
P10809_1012
74.7
P10809_1027
57.5
P10809_1046
43.0
P10809_1065
55.1
P10809_1111
68.2
Naive CD4 T-cell nTPM: 43.0
Samples: 6
Max nTPM: 69.3
Min nTPM: 25.6
P10809_1015
69.3
P10809_1030
30.7
P10809_1049
25.6
P10809_1068
43.6
P10809_1085
47.4
P10809_1112
41.6
Naive CD8 T-cell nTPM: 53.3
Samples: 6
Max nTPM: 73.4
Min nTPM: 39.0
P10809_1016
73.4
P10809_1031
49.4
P10809_1050
39.0
P10809_1069
48.9
P10809_1087
66.7
P10809_1110
42.5
T-reg nTPM: 29.0
Samples: 6
Max nTPM: 45.9
Min nTPM: 11.3
P10809_1018
45.9
P10809_1037
32.3
P10809_1056
11.3
P10809_1075
24.3
P10809_1094
26.7
P10809_1106
33.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
503.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 370.3
Samples: 4
Max nTPM: 385.8
Min nTPM: 336.0
RHH5202_R3573
374.2
RHH5230_R3602
385.8
RHH5259_R3631
385.1
RHH5288_R3660
336.0
Effector memory CD8 T-cell nTPM: 322.8
Samples: 4
Max nTPM: 380.9
Min nTPM: 277.8
RHH5203_R3574
336.5
RHH5231_R3603
277.8
RHH5260_R3632
380.9
RHH5289_R3661
295.9
MAIT T-cell nTPM: 503.2
Samples: 4
Max nTPM: 536.3
Min nTPM: 441.2
RHH5233_R3605
502.8
RHH5205_R3576
536.3
RHH5262_R3634
532.5
RHH5297_R3663
441.2
Memory CD4 T-cell TFH nTPM: 274.9
Samples: 4
Max nTPM: 310.6
Min nTPM: 258.1
RHH5300_R3666
263.0
RHH5236_R3608
267.8
RHH5265_R3637
258.1
RHH5208_R3579
310.6
Memory CD4 T-cell Th1 nTPM: 258.9
Samples: 4
Max nTPM: 281.3
Min nTPM: 219.3
RHH5210_R3581
274.1
RHH5302_R3668
260.7
RHH5238_R3610
219.3
RHH5267_R3639
281.3
Memory CD4 T-cell Th1/Th17 nTPM: 359.1
Samples: 4
Max nTPM: 385.0
Min nTPM: 345.7
RHH5303_R3669
385.0
RHH5211_R3582
345.7
RHH5239_R3611
354.2
RHH5268_R3640
351.3
Memory CD4 T-cell Th17 nTPM: 375.9
Samples: 4
Max nTPM: 430.7
Min nTPM: 332.9
RHH5304_R3670
430.7
RHH5212_R3583
332.9
RHH5240_R3612
406.8
RHH5269_R3641
333.2
Memory CD4 T-cell Th2 nTPM: 312.8
Samples: 4
Max nTPM: 341.7
Min nTPM: 287.3
RHH5305_R3671
287.3
RHH5213_R3584
341.7
RHH5241_R3613
318.7
RHH5270_R3642
303.5
Naive CD4 T-cell nTPM: 254.4
Samples: 4
Max nTPM: 304.8
Min nTPM: 221.7
RHH5306_R3672
263.1
RHH5214_R3585
221.7
RHH5242_R3614
228.1
RHH5271_R3643
304.8
Naive CD8 T-cell nTPM: 310.3
Samples: 4
Max nTPM: 367.9
Min nTPM: 278.8
RHH5201_R3572
367.9
RHH5229_R3601
278.8
RHH5258_R3630
282.7
RHH5287_R3659
311.6
Non-Vd2 gdTCR nTPM: 279.0
Samples: 4
Max nTPM: 328.6
Min nTPM: 229.2
RHH5235_R3607
328.6
RHH5264_R3636
326.3
RHH5207_R3578
229.2
RHH5299_R3665
231.9
T-reg nTPM: 201.4
Samples: 4
Max nTPM: 224.6
Min nTPM: 181.9
RHH5301_R3667
181.9
RHH5237_R3609
184.2
RHH5266_R3638
224.6
RHH5209_R3580
214.9
Terminal effector memory CD4 T-cell nTPM: 264.4
Samples: 2
Max nTPM: 282.7
Min nTPM: 246.1
RHH5243_R3615
246.1
RHH5272_R3644
282.7
Terminal effector memory CD8 T-cell nTPM: 276.1
Samples: 4
Max nTPM: 336.0
Min nTPM: 226.5
RHH5232_R3604
308.9
RHH5204_R3575
226.5
RHH5261_R3633
336.0
RHH5296_R3662
232.8
Vd2 gdTCR nTPM: 396.9
Samples: 4
Max nTPM: 494.0
Min nTPM: 315.8
RHH5234_R3606
417.2
RHH5206_R3577
315.8
RHH5263_R3635
494.0
RHH5298_R3664
360.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
