HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:346.8 nTPM
HPA Brain:727.9 nTPM
GTEx:346.8 nTPM
FANTOM5:819.7 Scaled Tags Per Million
Pig:869.2 nTPM
Mouse:1231.9 nTPM
Allen mouse:25.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017338
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 727.9
Sample id Sample description nTPM
Hippocampus
nTPM: 492.7
1898 Male, age 80, left hemisphere 585.1
1911 Female, age 85, right hemisphere 521.1
2148 Female, age 91, left hemisphere 512.4
2529 Female, age 94, left hemisphere 463.8
1855 Male, age 76, left hemisphere 448.4
2621 Female, age 67, right hemisphere 425.4
Dentate gyrus
nTPM: 471.6
1927 Female, age 91, both hemispheres 665.9
2246 Female, age 85, both hemispheres 516.8
2010 Male, age 76, both hemispheres 491.5
2528 Male, age 74, both hemispheres 488.8
2531 Female, age 67, both hemispheres 354.1
2530 Female, age 94, left hemisphere 312.5
Entorhinal gyrus
nTPM: 538.7
1938 Female, age 85, left hemisphere 717.6
2764 Male, age 80, right hemisphere 575.8
1787 Male, age 76, left hemisphere 567.7
2117 Female, age 91, right hemisphere 519.2
2613 Female, age 94, left hemisphere 465.5
2686 Male, age 75, right hemisphere 386.3
Hippocampus, CA1
nTPM: 604.5
2749 Male, age 80, left hemisphere 750.7
2527 Male, age 74, both hemispheres 653.6
2045 Male, age 76, both hemispheres 555.7
1873 Female, age 85, both hemispheres 555.1
2082 Female, age 91, right hemisphere 507.2
Hippocampus, CA2
nTPM: 496.4
2249 Male, age 74, both hemispheres 595.3
1892 Male, age 76, both hemispheres 533.9
2113 Female, age 91, right hemisphere 523.7
1963 Male, age 80, left hemisphere 485.5
1940 Female, age 85, left hemisphere 479.3
2437 Female, age 94, left hemisphere 360.7
Hippocampus, CA3
nTPM: 513.3
2137 Male, age 80, left hemisphere 691.5
2436 Male, age 74, both hemispheres 592.2
1867 Male, age 76, both hemispheres 514.3
1891 Female, age 85, both hemispheres 483.2
2620 Female, age 94, left hemisphere 424.4
2861 Female, age 67, both hemispheres 374.4
Parahippocampal cortex
nTPM: 606.4
2250 Female, age 67, right hemisphere 743.6
1850 Male, age 80, both hemispheres 730.4
1933 Female, age 85, both hemispheres 699.4
2693 Female, age 94, both hemispheres 634.7
1990 Female, age 91, right hemisphere 605.4
2692 Male, age 74, both hemispheres 566.9
2245 Female, age 91, both hemispheres 557.8
2622 Female, age 67, right hemisphere 557.3
2018 Male, age 76, both hemispheres 516.8
2532 Female, age 72, left hemisphere 451.7
Perirhinal gyrus
nTPM: 727.9
1847 Female, age 91, left hemisphere 845.2
1794 Male, age 80, right hemisphere 806.4
1841 Female, age 85, right hemisphere 786.1
2521 Female, age 94, right hemisphere 604.4
2848 Male, age 76, right hemisphere 597.7
Subiculum
nTPM: 486.9
1977 Female, age 85, both hemispheres 603.3
2619 Male, age 74, both hemispheres 569.7
2729 Female, age 91, right hemisphere 559.6
1901 Male, age 80, both hemispheres 458.7
2438 Female, age 94, left hemisphere 374.7
2042 Male, age 76, both hemispheres 355.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 346.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 346.8
Samples: 197

Max nTPM: 1028.6
Min nTPM: 60.1
Std nTPM: 151.6
Median nTPM: 351.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1028.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 911.2
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 820.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 681.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 627.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 616.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 597.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 594.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 582.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 578.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 577.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 819.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 819.7
FF:10153-102I9 76 years, female 873.0
FF:10169-103B7 60 years, female 766.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 869.2
Pig sample Sample description nTPM
Subiculum
nTPM: 860.6
Samples: 4

Max nTPM: 1094.2
Min nTPM: 700.7
Sample A Female 1094.2
Sample B Female 889.5
Sample C Male 700.7
Sample D Male 758.1
Dorsal hippocampus
nTPM: 774.3
Samples: 4

Max nTPM: 910.8
Min nTPM: 650.4
Sample A Female 910.8
Sample B Female 814.7
Sample C Male 650.4
Sample D Male 721.1
Entorhinal cortex
nTPM: 869.1
Samples: 4

Max nTPM: 1011.0
Min nTPM: 692.4
Sample A Female 834.4
Sample B Female 1011.0
Sample C Male 938.7
Sample D Male 692.4
Ventral hippocampus
nTPM: 729.2
Samples: 4

Max nTPM: 785.1
Min nTPM: 686.6
Sample A Female 785.1
Sample B Female 710.5
Sample C Male 734.6
Sample D Male 686.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1231.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1231.9
Samples: 4

Max nTPM: 1357.8
Min nTPM: 1151.2
Sample A Male 1151.2
Sample B Male 1216.1
Sample C Female 1202.6
Sample D Female 1357.8
Hippocampal formation
nTPM: 1164.1
Samples: 4

Max nTPM: 1277.1
Min nTPM: 1065.2
Sample A Male 1277.1
Sample B Male 1166.5
Sample C Female 1147.6
Sample D Female 1065.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 25.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 25.8
68080704 Antisense, RP_040929_01_G03, Mouse strain C57BL/6J (56 days, male) 25.8

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