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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
104.9
nTPM
Monaco:
225.8
nTPM
Schmiedel:
2.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
104.9
HPA sample
nTPM
gdT-cell nTPM: 104.9
Samples: 6
Max nTPM: 128.8
Min nTPM: 81.4
P10809_1007
85.4
P10809_1022
122.7
P10809_1041
128.8
P10809_1060
81.4
P10809_1077
127.7
P10809_1098
83.1
MAIT T-cell nTPM: 0.2
Samples: 6
Max nTPM: 0.4
Min nTPM: 0.0
P10809_1006
0.4
P10809_1024
0.1
P10809_1043
0.0
P10809_1062
0.2
P10809_1083
0.1
P10809_1097
0.3
Memory CD4 T-cell nTPM: 17.9
Samples: 6
Max nTPM: 51.4
Min nTPM: 0.0
P10809_1014
0.6
P10809_1026
0.0
P10809_1045
7.9
P10809_1064
51.4
P10809_1086
46.6
P10809_1113
0.6
Memory CD8 T-cell nTPM: 60.0
Samples: 5
Max nTPM: 116.8
Min nTPM: 21.2
P10809_1012
23.1
P10809_1027
55.3
P10809_1046
83.5
P10809_1065
116.8
P10809_1111
21.2
Naive CD4 T-cell nTPM: 4.8
Samples: 6
Max nTPM: 24.2
Min nTPM: 0.0
P10809_1015
0.8
P10809_1030
0.0
P10809_1049
0.5
P10809_1068
3.2
P10809_1085
24.2
P10809_1112
0.0
Naive CD8 T-cell nTPM: 50.5
Samples: 6
Max nTPM: 118.6
Min nTPM: 6.4
P10809_1016
6.4
P10809_1031
32.2
P10809_1050
42.1
P10809_1069
92.1
P10809_1087
118.6
P10809_1110
11.7
T-reg nTPM: 0.1
Samples: 6
Max nTPM: 0.2
Min nTPM: 0.0
P10809_1018
0.0
P10809_1037
0.0
P10809_1056
0.0
P10809_1075
0.2
P10809_1094
0.1
P10809_1106
0.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
225.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1.6
Samples: 4
Max nTPM: 2.8
Min nTPM: 0.0
RHH5202_R3573
1.9
RHH5230_R3602
0.0
RHH5259_R3631
1.6
RHH5288_R3660
2.8
Effector memory CD8 T-cell nTPM: 127.1
Samples: 4
Max nTPM: 187.9
Min nTPM: 55.6
RHH5203_R3574
55.6
RHH5231_R3603
187.9
RHH5260_R3632
97.9
RHH5289_R3661
166.8
MAIT T-cell nTPM: 0.7
Samples: 4
Max nTPM: 1.2
Min nTPM: 0.0
RHH5233_R3605
1.0
RHH5205_R3576
0.6
RHH5262_R3634
0.0
RHH5297_R3663
1.2
Memory CD4 T-cell TFH nTPM: 0.4
Samples: 4
Max nTPM: 1.5
Min nTPM: 0.0
RHH5300_R3666
0.0
RHH5236_R3608
0.0
RHH5265_R3637
1.5
RHH5208_R3579
0.1
Memory CD4 T-cell Th1 nTPM: 6.1
Samples: 4
Max nTPM: 9.6
Min nTPM: 2.5
RHH5210_R3581
3.9
RHH5302_R3668
2.5
RHH5238_R3610
9.6
RHH5267_R3639
8.3
Memory CD4 T-cell Th1/Th17 nTPM: 1.3
Samples: 4
Max nTPM: 3.3
Min nTPM: 0.0
RHH5303_R3669
3.3
RHH5211_R3582
0.0
RHH5239_R3611
2.0
RHH5268_R3640
0.0
Memory CD4 T-cell Th17 nTPM: 3.7
Samples: 4
Max nTPM: 8.1
Min nTPM: 0.9
RHH5304_R3670
2.8
RHH5212_R3583
8.1
RHH5240_R3612
2.9
RHH5269_R3641
0.9
Memory CD4 T-cell Th2 nTPM: 2.0
Samples: 4
Max nTPM: 3.8
Min nTPM: 0.6
RHH5305_R3671
0.7
RHH5213_R3584
3.8
RHH5241_R3613
2.9
RHH5270_R3642
0.6
Naive CD4 T-cell nTPM: 4.7
Samples: 4
Max nTPM: 10.9
Min nTPM: 0.2
RHH5306_R3672
3.7
RHH5214_R3585
4.0
RHH5242_R3614
10.9
RHH5271_R3643
0.2
Naive CD8 T-cell nTPM: 0.0
Samples: 4
Max nTPM: 0.1
Min nTPM: 0.0
RHH5201_R3572
0.0
RHH5229_R3601
0.1
RHH5258_R3630
0.0
RHH5287_R3659
0.0
Non-Vd2 gdTCR nTPM: 193.5
Samples: 4
Max nTPM: 274.6
Min nTPM: 123.4
RHH5235_R3607
123.4
RHH5264_R3636
154.4
RHH5207_R3578
274.6
RHH5299_R3665
221.7
T-reg nTPM: 2.4
Samples: 4
Max nTPM: 3.0
Min nTPM: 1.9
RHH5301_R3667
1.9
RHH5237_R3609
2.2
RHH5266_R3638
2.3
RHH5209_R3580
3.0
Terminal effector memory CD4 T-cell nTPM: 154.9
Samples: 2
Max nTPM: 158.8
Min nTPM: 151.0
RHH5243_R3615
158.8
RHH5272_R3644
151.0
Terminal effector memory CD8 T-cell nTPM: 225.9
Samples: 4
Max nTPM: 285.4
Min nTPM: 135.5
RHH5232_R3604
263.0
RHH5204_R3575
135.5
RHH5261_R3633
219.5
RHH5296_R3662
285.4
Vd2 gdTCR nTPM: 55.1
Samples: 4
Max nTPM: 124.3
Min nTPM: 24.6
RHH5234_R3606
28.9
RHH5206_R3577
124.3
RHH5263_R3635
42.7
RHH5298_R3664
24.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
