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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
155.9
nTPM
Monaco:
209.9
nTPM
Schmiedel:
282.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
155.9
HPA sample
nTPM
gdT-cell nTPM: 117.7
Samples: 6
Max nTPM: 151.3
Min nTPM: 78.3
P10809_1007
78.3
P10809_1022
151.3
P10809_1041
148.7
P10809_1060
96.9
P10809_1077
110.4
P10809_1098
120.6
MAIT T-cell nTPM: 155.9
Samples: 6
Max nTPM: 211.2
Min nTPM: 127.7
P10809_1006
127.7
P10809_1024
211.2
P10809_1043
139.1
P10809_1062
131.5
P10809_1083
149.9
P10809_1097
175.9
Memory CD4 T-cell nTPM: 131.7
Samples: 6
Max nTPM: 157.7
Min nTPM: 105.3
P10809_1014
105.3
P10809_1026
157.7
P10809_1045
146.5
P10809_1064
116.9
P10809_1086
129.0
P10809_1113
134.8
Memory CD8 T-cell nTPM: 130.7
Samples: 5
Max nTPM: 159.2
Min nTPM: 104.6
P10809_1012
104.6
P10809_1027
130.3
P10809_1046
159.2
P10809_1065
106.7
P10809_1111
152.5
Naive CD4 T-cell nTPM: 122.2
Samples: 6
Max nTPM: 167.8
Min nTPM: 93.7
P10809_1015
93.7
P10809_1030
109.1
P10809_1049
167.8
P10809_1068
105.1
P10809_1085
126.6
P10809_1112
130.8
Naive CD8 T-cell nTPM: 124.1
Samples: 6
Max nTPM: 151.3
Min nTPM: 99.0
P10809_1016
104.8
P10809_1031
123.0
P10809_1050
151.3
P10809_1069
99.0
P10809_1087
121.0
P10809_1110
145.2
T-reg nTPM: 150.7
Samples: 6
Max nTPM: 170.7
Min nTPM: 124.2
P10809_1018
124.2
P10809_1037
151.4
P10809_1056
155.0
P10809_1075
145.0
P10809_1094
157.6
P10809_1106
170.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
209.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 162.9
Samples: 4
Max nTPM: 184.8
Min nTPM: 152.0
RHH5202_R3573
152.0
RHH5230_R3602
184.8
RHH5259_R3631
161.7
RHH5288_R3660
153.2
Effector memory CD8 T-cell nTPM: 209.9
Samples: 4
Max nTPM: 249.5
Min nTPM: 191.0
RHH5203_R3574
249.5
RHH5231_R3603
191.0
RHH5260_R3632
193.3
RHH5289_R3661
205.9
MAIT T-cell nTPM: 194.6
Samples: 4
Max nTPM: 242.5
Min nTPM: 140.9
RHH5233_R3605
182.5
RHH5205_R3576
212.3
RHH5262_R3634
242.5
RHH5297_R3663
140.9
Memory CD4 T-cell TFH nTPM: 149.6
Samples: 4
Max nTPM: 170.5
Min nTPM: 118.5
RHH5300_R3666
118.5
RHH5236_R3608
148.1
RHH5265_R3637
170.5
RHH5208_R3579
161.2
Memory CD4 T-cell Th1 nTPM: 140.3
Samples: 4
Max nTPM: 181.6
Min nTPM: 98.3
RHH5210_R3581
134.3
RHH5302_R3668
147.0
RHH5238_R3610
98.3
RHH5267_R3639
181.6
Memory CD4 T-cell Th1/Th17 nTPM: 167.0
Samples: 4
Max nTPM: 175.2
Min nTPM: 149.9
RHH5303_R3669
168.2
RHH5211_R3582
175.2
RHH5239_R3611
149.9
RHH5268_R3640
174.8
Memory CD4 T-cell Th17 nTPM: 188.7
Samples: 4
Max nTPM: 212.4
Min nTPM: 173.5
RHH5304_R3670
173.5
RHH5212_R3583
174.4
RHH5240_R3612
212.4
RHH5269_R3641
194.5
Memory CD4 T-cell Th2 nTPM: 172.6
Samples: 4
Max nTPM: 216.4
Min nTPM: 125.2
RHH5305_R3671
168.6
RHH5213_R3584
180.3
RHH5241_R3613
125.2
RHH5270_R3642
216.4
Naive CD4 T-cell nTPM: 150.6
Samples: 4
Max nTPM: 193.9
Min nTPM: 121.2
RHH5306_R3672
121.2
RHH5214_R3585
137.3
RHH5242_R3614
149.9
RHH5271_R3643
193.9
Naive CD8 T-cell nTPM: 154.0
Samples: 4
Max nTPM: 175.3
Min nTPM: 101.9
RHH5201_R3572
172.4
RHH5229_R3601
101.9
RHH5258_R3630
175.3
RHH5287_R3659
166.3
Non-Vd2 gdTCR nTPM: 166.6
Samples: 4
Max nTPM: 183.6
Min nTPM: 137.2
RHH5235_R3607
163.5
RHH5264_R3636
181.9
RHH5207_R3578
183.6
RHH5299_R3665
137.2
T-reg nTPM: 149.9
Samples: 4
Max nTPM: 176.3
Min nTPM: 124.6
RHH5301_R3667
124.6
RHH5237_R3609
147.0
RHH5266_R3638
176.3
RHH5209_R3580
151.8
Terminal effector memory CD4 T-cell nTPM: 175.5
Samples: 2
Max nTPM: 202.3
Min nTPM: 148.7
RHH5243_R3615
148.7
RHH5272_R3644
202.3
Terminal effector memory CD8 T-cell nTPM: 166.8
Samples: 4
Max nTPM: 204.9
Min nTPM: 142.2
RHH5232_R3604
163.8
RHH5204_R3575
156.4
RHH5261_R3633
204.9
RHH5296_R3662
142.2
Vd2 gdTCR nTPM: 154.6
Samples: 4
Max nTPM: 192.4
Min nTPM: 131.4
RHH5234_R3606
131.4
RHH5206_R3577
154.0
RHH5263_R3635
192.4
RHH5298_R3664
140.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
