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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
164.3
nTPM
Monaco:
921.5
nTPM
Schmiedel:
273.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
164.3
HPA sample
nTPM
gdT-cell nTPM: 119.7
Samples: 6
Max nTPM: 206.6
Min nTPM: 65.5
P10809_1007
106.8
P10809_1022
65.5
P10809_1041
110.1
P10809_1060
110.3
P10809_1077
118.8
P10809_1098
206.6
MAIT T-cell nTPM: 164.3
Samples: 6
Max nTPM: 259.1
Min nTPM: 106.1
P10809_1006
204.3
P10809_1024
131.4
P10809_1043
138.6
P10809_1062
146.1
P10809_1083
106.1
P10809_1097
259.1
Memory CD4 T-cell nTPM: 94.5
Samples: 6
Max nTPM: 124.7
Min nTPM: 48.8
P10809_1014
110.3
P10809_1026
48.8
P10809_1045
69.5
P10809_1064
106.3
P10809_1086
107.4
P10809_1113
124.7
Memory CD8 T-cell nTPM: 139.8
Samples: 5
Max nTPM: 223.9
Min nTPM: 73.3
P10809_1012
134.7
P10809_1027
97.5
P10809_1046
73.3
P10809_1065
169.6
P10809_1111
223.9
Naive CD4 T-cell nTPM: 63.0
Samples: 6
Max nTPM: 84.1
Min nTPM: 36.9
P10809_1015
84.1
P10809_1030
36.9
P10809_1049
61.0
P10809_1068
48.0
P10809_1085
70.6
P10809_1112
77.2
Naive CD8 T-cell nTPM: 118.5
Samples: 6
Max nTPM: 187.7
Min nTPM: 82.5
P10809_1016
82.9
P10809_1031
82.5
P10809_1050
114.0
P10809_1069
116.3
P10809_1087
187.7
P10809_1110
127.6
T-reg nTPM: 76.1
Samples: 6
Max nTPM: 116.7
Min nTPM: 46.8
P10809_1018
81.0
P10809_1037
46.8
P10809_1056
92.2
P10809_1075
54.1
P10809_1094
65.5
P10809_1106
116.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
921.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 528.9
Samples: 4
Max nTPM: 701.4
Min nTPM: 372.5
RHH5202_R3573
630.4
RHH5230_R3602
701.4
RHH5259_R3631
372.5
RHH5288_R3660
411.3
Effector memory CD8 T-cell nTPM: 836.8
Samples: 4
Max nTPM: 1013.4
Min nTPM: 650.3
RHH5203_R3574
924.2
RHH5231_R3603
1013.4
RHH5260_R3632
759.2
RHH5289_R3661
650.3
MAIT T-cell nTPM: 921.6
Samples: 4
Max nTPM: 1081.5
Min nTPM: 686.3
RHH5233_R3605
1024.1
RHH5205_R3576
1081.5
RHH5262_R3634
894.3
RHH5297_R3663
686.3
Memory CD4 T-cell TFH nTPM: 413.0
Samples: 4
Max nTPM: 543.8
Min nTPM: 317.8
RHH5300_R3666
317.8
RHH5236_R3608
543.8
RHH5265_R3637
330.7
RHH5208_R3579
459.5
Memory CD4 T-cell Th1 nTPM: 396.8
Samples: 4
Max nTPM: 442.4
Min nTPM: 352.8
RHH5210_R3581
442.4
RHH5302_R3668
352.8
RHH5238_R3610
386.4
RHH5267_R3639
405.7
Memory CD4 T-cell Th1/Th17 nTPM: 510.2
Samples: 4
Max nTPM: 615.8
Min nTPM: 436.7
RHH5303_R3669
528.8
RHH5211_R3582
615.8
RHH5239_R3611
459.5
RHH5268_R3640
436.7
Memory CD4 T-cell Th17 nTPM: 508.3
Samples: 4
Max nTPM: 629.9
Min nTPM: 387.5
RHH5304_R3670
481.1
RHH5212_R3583
534.6
RHH5240_R3612
629.9
RHH5269_R3641
387.5
Memory CD4 T-cell Th2 nTPM: 430.9
Samples: 4
Max nTPM: 500.1
Min nTPM: 347.4
RHH5305_R3671
347.4
RHH5213_R3584
489.3
RHH5241_R3613
500.1
RHH5270_R3642
386.6
Naive CD4 T-cell nTPM: 327.9
Samples: 4
Max nTPM: 382.3
Min nTPM: 267.0
RHH5306_R3672
267.0
RHH5214_R3585
382.3
RHH5242_R3614
372.7
RHH5271_R3643
289.4
Naive CD8 T-cell nTPM: 417.7
Samples: 4
Max nTPM: 554.9
Min nTPM: 327.1
RHH5201_R3572
554.9
RHH5229_R3601
440.8
RHH5258_R3630
327.1
RHH5287_R3659
347.9
Non-Vd2 gdTCR nTPM: 854.6
Samples: 4
Max nTPM: 971.5
Min nTPM: 600.4
RHH5235_R3607
960.3
RHH5264_R3636
886.1
RHH5207_R3578
971.5
RHH5299_R3665
600.4
T-reg nTPM: 395.3
Samples: 4
Max nTPM: 535.6
Min nTPM: 271.4
RHH5301_R3667
271.4
RHH5237_R3609
535.6
RHH5266_R3638
335.1
RHH5209_R3580
438.9
Terminal effector memory CD4 T-cell nTPM: 723.2
Samples: 2
Max nTPM: 868.1
Min nTPM: 578.3
RHH5243_R3615
868.1
RHH5272_R3644
578.3
Terminal effector memory CD8 T-cell nTPM: 837.0
Samples: 4
Max nTPM: 992.7
Min nTPM: 700.5
RHH5232_R3604
992.7
RHH5204_R3575
843.7
RHH5261_R3633
811.0
RHH5296_R3662
700.5
Vd2 gdTCR nTPM: 769.6
Samples: 4
Max nTPM: 890.3
Min nTPM: 524.3
RHH5234_R3606
866.5
RHH5206_R3577
890.3
RHH5263_R3635
797.1
RHH5298_R3664
524.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
