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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
67.9
nTPM
Monaco:
92.6
nTPM
Schmiedel:
55.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
67.9
HPA sample
nTPM
gdT-cell nTPM: 24.1
Samples: 6
Max nTPM: 31.7
Min nTPM: 20.0
P10809_1007
20.0
P10809_1022
21.3
P10809_1041
31.7
P10809_1060
22.0
P10809_1077
25.7
P10809_1098
23.7
MAIT T-cell nTPM: 22.4
Samples: 6
Max nTPM: 36.8
Min nTPM: 17.6
P10809_1006
19.6
P10809_1024
21.5
P10809_1043
36.8
P10809_1062
20.2
P10809_1083
18.9
P10809_1097
17.6
Memory CD4 T-cell nTPM: 51.3
Samples: 6
Max nTPM: 59.3
Min nTPM: 44.4
P10809_1014
46.1
P10809_1026
44.4
P10809_1045
59.3
P10809_1064
52.5
P10809_1086
48.6
P10809_1113
56.9
Memory CD8 T-cell nTPM: 42.7
Samples: 5
Max nTPM: 47.8
Min nTPM: 39.6
P10809_1012
39.6
P10809_1027
42.4
P10809_1046
42.7
P10809_1065
40.8
P10809_1111
47.8
Naive CD4 T-cell nTPM: 19.8
Samples: 6
Max nTPM: 26.8
Min nTPM: 13.5
P10809_1015
18.1
P10809_1030
13.5
P10809_1049
21.8
P10809_1068
21.0
P10809_1085
26.8
P10809_1112
17.5
Naive CD8 T-cell nTPM: 22.5
Samples: 6
Max nTPM: 35.4
Min nTPM: 12.6
P10809_1016
15.7
P10809_1031
22.2
P10809_1050
25.6
P10809_1069
23.6
P10809_1087
35.4
P10809_1110
12.6
T-reg nTPM: 67.9
Samples: 6
Max nTPM: 113.3
Min nTPM: 48.9
P10809_1018
59.5
P10809_1037
48.9
P10809_1056
113.3
P10809_1075
68.4
P10809_1094
49.4
P10809_1106
67.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
92.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 39.4
Samples: 4
Max nTPM: 50.9
Min nTPM: 26.6
RHH5202_R3573
49.7
RHH5230_R3602
26.6
RHH5259_R3631
30.5
RHH5288_R3660
50.9
Effector memory CD8 T-cell nTPM: 38.9
Samples: 4
Max nTPM: 57.2
Min nTPM: 28.6
RHH5203_R3574
57.2
RHH5231_R3603
35.4
RHH5260_R3632
34.3
RHH5289_R3661
28.6
MAIT T-cell nTPM: 22.4
Samples: 4
Max nTPM: 26.4
Min nTPM: 17.0
RHH5233_R3605
26.4
RHH5205_R3576
21.9
RHH5262_R3634
17.0
RHH5297_R3663
24.2
Memory CD4 T-cell TFH nTPM: 92.6
Samples: 4
Max nTPM: 114.4
Min nTPM: 78.6
RHH5300_R3666
97.3
RHH5236_R3608
114.4
RHH5265_R3637
78.6
RHH5208_R3579
80.0
Memory CD4 T-cell Th1 nTPM: 54.0
Samples: 4
Max nTPM: 68.6
Min nTPM: 43.7
RHH5210_R3581
59.4
RHH5302_R3668
68.6
RHH5238_R3610
43.7
RHH5267_R3639
44.3
Memory CD4 T-cell Th1/Th17 nTPM: 53.0
Samples: 4
Max nTPM: 90.2
Min nTPM: 24.9
RHH5303_R3669
53.4
RHH5211_R3582
90.2
RHH5239_R3611
24.9
RHH5268_R3640
43.3
Memory CD4 T-cell Th17 nTPM: 56.9
Samples: 4
Max nTPM: 86.4
Min nTPM: 39.8
RHH5304_R3670
50.1
RHH5212_R3583
86.4
RHH5240_R3612
39.8
RHH5269_R3641
51.4
Memory CD4 T-cell Th2 nTPM: 81.4
Samples: 4
Max nTPM: 88.3
Min nTPM: 74.6
RHH5305_R3671
88.3
RHH5213_R3584
79.8
RHH5241_R3613
74.6
RHH5270_R3642
82.8
Naive CD4 T-cell nTPM: 26.5
Samples: 4
Max nTPM: 32.1
Min nTPM: 18.0
RHH5306_R3672
24.6
RHH5214_R3585
31.4
RHH5242_R3614
32.1
RHH5271_R3643
18.0
Naive CD8 T-cell nTPM: 10.9
Samples: 4
Max nTPM: 15.9
Min nTPM: 5.6
RHH5201_R3572
5.6
RHH5229_R3601
7.2
RHH5258_R3630
15.9
RHH5287_R3659
14.7
Non-Vd2 gdTCR nTPM: 26.7
Samples: 4
Max nTPM: 35.6
Min nTPM: 20.6
RHH5235_R3607
20.6
RHH5264_R3636
35.6
RHH5207_R3578
21.2
RHH5299_R3665
29.2
T-reg nTPM: 52.6
Samples: 4
Max nTPM: 62.9
Min nTPM: 38.9
RHH5301_R3667
58.0
RHH5237_R3609
62.9
RHH5266_R3638
38.9
RHH5209_R3580
50.6
Terminal effector memory CD4 T-cell nTPM: 33.2
Samples: 2
Max nTPM: 38.4
Min nTPM: 28.0
RHH5243_R3615
28.0
RHH5272_R3644
38.4
Terminal effector memory CD8 T-cell nTPM: 34.1
Samples: 4
Max nTPM: 52.9
Min nTPM: 15.3
RHH5232_R3604
33.1
RHH5204_R3575
52.9
RHH5261_R3633
15.3
RHH5296_R3662
35.2
Vd2 gdTCR nTPM: 25.6
Samples: 4
Max nTPM: 30.7
Min nTPM: 16.0
RHH5234_R3606
30.7
RHH5206_R3577
27.1
RHH5263_R3635
16.0
RHH5298_R3664
28.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
