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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
955.7
nTPM
FANTOM5:
1193.8
Scaled Tags Per Million
Pig:
464.9
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
955.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 827.1
2188
Female, age 91, both hemispheres
897.5
2090
Male, age 80, both hemispheres
835.6
1984
Male, age 76, both hemispheres
800.2
2301
Female, age 85, both hemispheres
775.1
Dorsal cochlear nucleus nTPM: 740.2
2187
Female, age 91, both hemispheres
855.1
2802
Male, age 74, right hemisphere
770.7
2370
Male, age 61, both hemispheres
722.1
2058
Male, age 76, both hemispheres
710.9
2378
Male, age 80, both hemispheres
642.1
Dorsal tegmental nucleus nTPM: 955.7
2358
Male, age 61, both hemispheres
1227.0
2083
Male, age 80, both hemispheres
1030.6
2326
Male, age 74, both hemispheres
819.1
1936
Male, age 76, left hemisphere
746.1
Dorsolateral tegmental area nTPM: 953.3
2337
Male, age 61, both hemispheres
1325.3
2654
Male, age 80, both hemispheres
944.4
2751
Female, age 85, both hemispheres
911.9
2360
Male, age 74, both hemispheres
872.6
2141
Male, age 76, both hemispheres
712.4
Kolliker-Fuse nucleus nTPM: 938.4
2315
Male, age 76, right hemisphere
1108.5
2163
Male, age 80, both hemispheres
927.0
2793
Female, age 91, left hemisphere
779.6
Lateral lemniscal nuclei nTPM: 766.9
2036
Male, age 80, both hemispheres
932.0
2746
Female, age 85, left hemisphere
880.3
2453
Male, age 74, right hemisphere
763.3
2320
Female, age 91, left hemisphere
637.5
2169
Male, age 76, both hemispheres
621.4
Lateral parabrachial nucleus nTPM: 893.5
2139
Female, age 85, right hemisphere
1017.1
2792
Male, age 76, both hemispheres
876.8
2013
Male, age 80, both hemispheres
845.1
2790
Male, age 61, both hemispheres
835.0
Lateral vestibular nucleus nTPM: 797.2
2311
Male, age 80, both hemispheres
839.4
2184
Male, age 76, both hemispheres
755.0
Locus coeruleus nTPM: 922.0
2123
Female, age 91, both hemispheres
1308.0
2014
Male, age 55, unknown
1059.0
2788
Male, age 74, unknown
913.5
2317
Female, age 72, unknown
885.7
2162
Male, age 80, both hemispheres
784.9
1980
Male, age 76, both hemispheres
754.5
2720
Male, age 74, both hemispheres
748.3
Medial parabrachial nucleus nTPM: 898.2
2170
Female, age 91, both hemispheres
1015.1
2156
Male, age 61, both hemispheres
988.6
2463
Female, age 85, right hemisphere
963.4
2854
Male, age 80, both hemispheres
831.1
2786
Male, age 76, both hemispheres
692.8
Medial periolivary nuclei nTPM: 804.7
2791
Male, age 74, right hemisphere
995.5
2171
Female, age 85, both hemispheres
851.4
2081
Male, age 80, both hemispheres
797.1
2063
Male, age 76, both hemispheres
743.0
2458
Female, age 91, both hemispheres
636.7
Motor facial nucleus nTPM: 766.8
2365
Male, age 74, right hemisphere
994.9
2126
Male, age 61, both hemispheres
850.1
2062
Male, age 76, both hemispheres
750.5
2795
Female, age 91, both hemispheres
714.0
2697
Female, age 85, both hemispheres
711.6
2327
Male, age 80, both hemispheres
579.6
Motor trigeminal nucleus nTPM: 775.8
2335
Male, age 61, both hemispheres
978.5
2560
Male, age 74, both hemispheres
828.6
2079
Male, age 80, both hemispheres
807.2
2321
Female, age 91, both hemispheres
651.2
2309
Male, age 76, both hemispheres
613.5
Nuclei of the trapezoid body nTPM: 748.3
2735
Female, age 85, both hemispheres
880.2
1983
Male, age 76, both hemispheres
780.2
2159
Male, age 61, both hemispheres
746.4
2166
Male, age 80, both hemispheres
735.7
2368
Female, age 91, both hemispheres
599.2
Nucleus raphe magnus nTPM: 761.3
2455
Male, age 74, both hemispheres
874.4
2172
Female, age 85, both hemispheres
843.0
2160
Male, age 61, both hemispheres
816.2
2328
Male, age 80, both hemispheres
710.8
2051
Male, age 76, both hemispheres
671.1
2459
Female, age 91, both hemispheres
652.2
Paramedian reticular nucleus nTPM: 879.7
2057
Male, age 80, both hemispheres
985.1
2050
Female, age 85, both hemispheres
944.6
2313
Male, age 61, both hemispheres
850.3
2052
Male, age 76, both hemispheres
738.7
Pedunculopontine tegmental nucleus nTPM: 941.5
2338
Male, age 61, both hemispheres
1118.0
2334
Male, age 80, both hemispheres
881.4
1921
Female, age 85, both hemispheres
825.0
Pontine nuclei nTPM: 893.5
2787
Female, age 85, both hemispheres
1152.6
1863
Male, age 55, unknown
1122.6
2454
Male, age 74, left hemisphere
971.0
2109
Female, age 72, unknown
941.3
2319
Female, age 91, both hemispheres
779.1
2727
Male, age 61, right hemisphere
772.7
2115
Male, age 80, left hemisphere
760.4
1968
Male, age 76, left hemisphere
648.8
Pontine raphe nucleus nTPM: 775.4
2122
Female, age 85, midline
913.4
2853
Male, age 76, midline
637.3
Posteroventral cochlear nucleus nTPM: 837.1
2135
Female, age 91, both hemispheres
932.8
2752
Female, age 85, both hemispheres
902.4
2341
Male, age 80, both hemispheres
864.9
2371
Male, age 61, both hemispheres
759.3
2070
Male, age 76, both hemispheres
726.1
Principal sensory trigeminal nucleus nTPM: 749.5
2008
Male, age 80, left hemisphere
830.4
2158
Male, age 61, both hemispheres
748.1
2324
Male, age 76, both hemispheres
727.4
2367
Female, age 91, left hemisphere
691.9
Reticular pontine nucleus, caudal nTPM: 748.6
2559
Male, age 74, both hemispheres
838.7
2332
Male, age 80, right hemisphere
744.9
2092
Male, age 76, both hemispheres
736.1
2457
Female, age 91, both hemispheres
674.9
Reticular pontine nucleus, oral nTPM: 868.8
2361
Male, age 74, both hemispheres
1036.7
1939
Male, age 80, both hemispheres
990.2
2012
Female, age 85, both hemispheres
894.6
2366
Female, age 91, both hemispheres
733.9
2167
Male, age 76, both hemispheres
688.4
Reticulotegmental nucleus nTPM: 741.3
2333
Male, age 80, both hemispheres
796.2
2322
Female, age 91, both hemispheres
774.5
2452
Male, age 74, both hemispheres
751.3
2325
Male, age 76, both hemispheres
643.1
Spinal trigeminal nucleus, oral nTPM: 745.2
2737
Female, age 85, both hemispheres
834.3
2164
Male, age 80, both hemispheres
787.3
1978
Male, age 76, both hemispheres
614.0
Subcoeruleus area nTPM: 749.7
1958
Male, age 80, both hemispheres
896.6
2369
Female, age 85, left hemisphere
833.9
2323
Female, age 91, left hemisphere
776.5
2451
Male, age 74, both hemispheres
648.9
2089
Male, age 76, left hemisphere
592.7
Superior olive nTPM: 799.7
2364
Male, age 74, right hemisphere
1021.1
1875
Female, age 85, both hemispheres
932.4
2020
Male, age 76, both hemispheres
712.2
2329
Male, age 80, right hemisphere
672.5
2561
Female, age 91, both hemispheres
660.2
Ventral periolivary nuclei nTPM: 733.1
2130
Female, age 85, both hemispheres
822.7
2165
Male, age 80, both hemispheres
812.8
2023
Male, age 76, both hemispheres
754.2
2794
Female, age 91, left hemisphere
542.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 902.8
2359
Male, age 61, both hemispheres
1708.6
2449
Male, age 74, both hemispheres
865.1
2840
Female, age 85, both hemispheres
851.8
2161
Male, age 80, both hemispheres
729.1
1959
Male, age 76, both hemispheres
666.0
2456
Female, age 91, both hemispheres
596.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
