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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
500.6
nTPM
Monaco:
2947.4
nTPM
Schmiedel:
1246.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
500.6
HPA sample
nTPM
gdT-cell nTPM: 432.7
Samples: 6
Max nTPM: 611.6
Min nTPM: 319.1
P10809_1007
611.6
P10809_1022
495.7
P10809_1041
479.0
P10809_1060
326.0
P10809_1077
364.8
P10809_1098
319.1
MAIT T-cell nTPM: 413.4
Samples: 6
Max nTPM: 674.3
Min nTPM: 308.3
P10809_1006
674.3
P10809_1024
384.6
P10809_1043
395.5
P10809_1062
308.3
P10809_1083
364.8
P10809_1097
353.0
Memory CD4 T-cell nTPM: 376.3
Samples: 6
Max nTPM: 617.7
Min nTPM: 268.9
P10809_1014
617.7
P10809_1026
390.5
P10809_1045
391.3
P10809_1064
309.8
P10809_1086
268.9
P10809_1113
279.8
Memory CD8 T-cell nTPM: 449.9
Samples: 5
Max nTPM: 741.1
Min nTPM: 280.4
P10809_1012
741.1
P10809_1027
403.4
P10809_1046
421.1
P10809_1065
403.4
P10809_1111
280.4
Naive CD4 T-cell nTPM: 293.4
Samples: 6
Max nTPM: 548.3
Min nTPM: 217.1
P10809_1015
548.3
P10809_1030
262.6
P10809_1049
262.4
P10809_1068
217.1
P10809_1085
252.6
P10809_1112
217.5
Naive CD8 T-cell nTPM: 351.7
Samples: 6
Max nTPM: 613.0
Min nTPM: 228.0
P10809_1016
613.0
P10809_1031
309.9
P10809_1050
323.4
P10809_1069
340.3
P10809_1087
295.5
P10809_1110
228.0
T-reg nTPM: 500.6
Samples: 6
Max nTPM: 805.0
Min nTPM: 378.4
P10809_1018
805.0
P10809_1037
496.2
P10809_1056
481.5
P10809_1075
378.4
P10809_1094
428.5
P10809_1106
414.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2947.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 2517.3
Samples: 4
Max nTPM: 3267.5
Min nTPM: 1939.8
RHH5202_R3573
2633.5
RHH5230_R3602
3267.5
RHH5259_R3631
1939.8
RHH5288_R3660
2228.5
Effector memory CD8 T-cell nTPM: 2823.9
Samples: 4
Max nTPM: 3161.0
Min nTPM: 2480.0
RHH5203_R3574
3161.0
RHH5231_R3603
2742.7
RHH5260_R3632
2480.0
RHH5289_R3661
2911.8
MAIT T-cell nTPM: 2928.0
Samples: 4
Max nTPM: 3486.4
Min nTPM: 2380.9
RHH5233_R3605
3174.6
RHH5205_R3576
3486.4
RHH5262_R3634
2670.0
RHH5297_R3663
2380.9
Memory CD4 T-cell TFH nTPM: 2392.5
Samples: 4
Max nTPM: 2909.2
Min nTPM: 2031.3
RHH5300_R3666
2208.0
RHH5236_R3608
2031.3
RHH5265_R3637
2421.5
RHH5208_R3579
2909.2
Memory CD4 T-cell Th1 nTPM: 2345.3
Samples: 4
Max nTPM: 2410.3
Min nTPM: 2276.1
RHH5210_R3581
2276.1
RHH5302_R3668
2311.8
RHH5238_R3610
2383.1
RHH5267_R3639
2410.3
Memory CD4 T-cell Th1/Th17 nTPM: 2558.1
Samples: 4
Max nTPM: 2913.7
Min nTPM: 2078.7
RHH5303_R3669
2425.3
RHH5211_R3582
2814.7
RHH5239_R3611
2913.7
RHH5268_R3640
2078.7
Memory CD4 T-cell Th17 nTPM: 2763.9
Samples: 4
Max nTPM: 3365.3
Min nTPM: 2276.7
RHH5304_R3670
2839.3
RHH5212_R3583
2574.3
RHH5240_R3612
3365.3
RHH5269_R3641
2276.7
Memory CD4 T-cell Th2 nTPM: 2602.8
Samples: 4
Max nTPM: 2834.1
Min nTPM: 2411.1
RHH5305_R3671
2497.0
RHH5213_R3584
2834.1
RHH5241_R3613
2668.8
RHH5270_R3642
2411.1
Naive CD4 T-cell nTPM: 1795.0
Samples: 4
Max nTPM: 1933.4
Min nTPM: 1709.8
RHH5306_R3672
1726.8
RHH5214_R3585
1809.8
RHH5242_R3614
1933.4
RHH5271_R3643
1709.8
Naive CD8 T-cell nTPM: 1594.9
Samples: 4
Max nTPM: 1929.3
Min nTPM: 1392.7
RHH5201_R3572
1929.3
RHH5229_R3601
1392.7
RHH5258_R3630
1488.3
RHH5287_R3659
1569.3
Non-Vd2 gdTCR nTPM: 2918.2
Samples: 4
Max nTPM: 3500.2
Min nTPM: 2331.7
RHH5235_R3607
3500.2
RHH5264_R3636
2648.5
RHH5207_R3578
3192.4
RHH5299_R3665
2331.7
T-reg nTPM: 2223.9
Samples: 4
Max nTPM: 2329.5
Min nTPM: 2134.8
RHH5301_R3667
2144.8
RHH5237_R3609
2134.8
RHH5266_R3638
2329.5
RHH5209_R3580
2286.4
Terminal effector memory CD4 T-cell nTPM: 2947.5
Samples: 2
Max nTPM: 3324.5
Min nTPM: 2570.4
RHH5243_R3615
3324.5
RHH5272_R3644
2570.4
Terminal effector memory CD8 T-cell nTPM: 2782.1
Samples: 4
Max nTPM: 3251.4
Min nTPM: 2425.7
RHH5232_R3604
3251.4
RHH5204_R3575
2425.7
RHH5261_R3633
2651.9
RHH5296_R3662
2799.3
Vd2 gdTCR nTPM: 2781.2
Samples: 4
Max nTPM: 3187.7
Min nTPM: 2296.6
RHH5234_R3606
3187.7
RHH5206_R3577
2841.2
RHH5263_R3635
2799.1
RHH5298_R3664
2296.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.