HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:5.8 nTPM
HPA Brain:16.3 nTPM
GTEx:5.8 nTPM
FANTOM5:16.6 Scaled Tags Per Million
Pig:21.8 nTPM
Mouse:6.9 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047134
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.3
Sample id Sample description nTPM
Hippocampus
nTPM: 15.0
2529 Female, age 94, left hemisphere 17.1
1911 Female, age 85, right hemisphere 15.8
1855 Male, age 76, left hemisphere 15.3
2148 Female, age 91, left hemisphere 14.7
1898 Male, age 80, left hemisphere 14.0
2621 Female, age 67, right hemisphere 12.8
Dentate gyrus
nTPM: 14.8
2010 Male, age 76, both hemispheres 15.7
2246 Female, age 85, both hemispheres 15.5
2528 Male, age 74, both hemispheres 15.5
1927 Female, age 91, both hemispheres 15.0
2530 Female, age 94, left hemisphere 14.9
2531 Female, age 67, both hemispheres 12.4
Entorhinal gyrus
nTPM: 13.9
2117 Female, age 91, right hemisphere 16.3
1787 Male, age 76, left hemisphere 13.9
1938 Female, age 85, left hemisphere 13.9
2764 Male, age 80, right hemisphere 13.6
2613 Female, age 94, left hemisphere 12.8
2686 Male, age 75, right hemisphere 12.8
Hippocampus, CA1
nTPM: 15.0
2082 Female, age 91, right hemisphere 17.1
2045 Male, age 76, both hemispheres 16.8
2527 Male, age 74, both hemispheres 15.1
1873 Female, age 85, both hemispheres 15.0
2749 Male, age 80, left hemisphere 11.1
Hippocampus, CA2
nTPM: 15.4
2113 Female, age 91, right hemisphere 16.5
2249 Male, age 74, both hemispheres 16.1
1940 Female, age 85, left hemisphere 16.0
2437 Female, age 94, left hemisphere 15.9
1963 Male, age 80, left hemisphere 14.4
1892 Male, age 76, both hemispheres 13.4
Hippocampus, CA3
nTPM: 14.5
2436 Male, age 74, both hemispheres 16.9
1891 Female, age 85, both hemispheres 16.7
1867 Male, age 76, both hemispheres 14.1
2620 Female, age 94, left hemisphere 14.0
2137 Male, age 80, left hemisphere 13.8
2861 Female, age 67, both hemispheres 11.3
Parahippocampal cortex
nTPM: 14.5
2018 Male, age 76, both hemispheres 16.6
1990 Female, age 91, right hemisphere 16.1
2250 Female, age 67, right hemisphere 15.8
2692 Male, age 74, both hemispheres 14.9
2693 Female, age 94, both hemispheres 14.4
1850 Male, age 80, both hemispheres 14.0
2532 Female, age 72, left hemisphere 14.0
1933 Female, age 85, both hemispheres 13.9
2245 Female, age 91, both hemispheres 13.7
2622 Female, age 67, right hemisphere 11.8
Perirhinal gyrus
nTPM: 13.8
2848 Male, age 76, right hemisphere 14.3
1841 Female, age 85, right hemisphere 14.2
1794 Male, age 80, right hemisphere 14.0
1847 Female, age 91, left hemisphere 13.3
2521 Female, age 94, right hemisphere 13.1
Subiculum
nTPM: 16.3
2042 Male, age 76, both hemispheres 17.7
1901 Male, age 80, both hemispheres 17.0
2729 Female, age 91, right hemisphere 17.0
2438 Female, age 94, left hemisphere 16.5
2619 Male, age 74, both hemispheres 15.6
1977 Female, age 85, both hemispheres 14.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 5.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5.8
Samples: 197

Max nTPM: 10.8
Min nTPM: 2.7
Std nTPM: 1.4
Median nTPM: 5.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 10.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 10.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 9.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 9.4
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 9.0
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 8.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 8.9
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 8.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 8.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 8.6
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 8.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.6
FF:10153-102I9 76 years, female 18.8
FF:10169-103B7 60 years, female 14.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.8
Pig sample Sample description nTPM
Subiculum
nTPM: 19.7
Samples: 4

Max nTPM: 22.6
Min nTPM: 18.5
Sample A Female 18.5
Sample B Female 18.7
Sample C Male 18.9
Sample D Male 22.6
Dorsal hippocampus
nTPM: 15.3
Samples: 4

Max nTPM: 16.9
Min nTPM: 13.6
Sample A Female 14.1
Sample B Female 13.6
Sample C Male 16.9
Sample D Male 16.6
Entorhinal cortex
nTPM: 21.9
Samples: 4

Max nTPM: 23.0
Min nTPM: 18.9
Sample A Female 18.9
Sample B Female 22.6
Sample C Male 23.0
Sample D Male 22.9
Ventral hippocampus
nTPM: 17.0
Samples: 4

Max nTPM: 18.6
Min nTPM: 16.0
Sample A Female 18.6
Sample B Female 17.3
Sample C Male 16.0
Sample D Male 16.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.9
Samples: 4

Max nTPM: 7.7
Min nTPM: 5.7
Sample A Male 7.3
Sample B Male 7.7
Sample C Female 5.7
Sample D Female 6.7
Hippocampal formation
nTPM: 6.3
Samples: 4

Max nTPM: 6.7
Min nTPM: 5.8
Sample A Male 6.7
Sample B Male 6.4
Sample C Female 6.3
Sample D Female 5.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
69527024 Antisense, RP_050421_02_B05, Mouse strain C57BL/6J (56 days, male) 0.7

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