HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:13.9 nTPM
HPA Brain:119.7 nTPM
GTEx:13.9 nTPM
FANTOM5:180.5 Scaled Tags Per Million
Pig:79.9 nTPM
Mouse:33.1 nTPM
Allen mouse:6.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048741Antibody CAB001983
Glial cells Not detectedLow
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 119.7
Sample id Sample description nTPM
Hippocampus
nTPM: 102.5
1898 Male, age 80, left hemisphere 129.2
2529 Female, age 94, left hemisphere 104.4
2621 Female, age 67, right hemisphere 99.4
1855 Male, age 76, left hemisphere 95.6
1911 Female, age 85, right hemisphere 95.3
2148 Female, age 91, left hemisphere 90.9
Dentate gyrus
nTPM: 105.4
2010 Male, age 76, both hemispheres 118.2
2530 Female, age 94, left hemisphere 112.4
2528 Male, age 74, both hemispheres 101.8
2246 Female, age 85, both hemispheres 101.3
2531 Female, age 67, both hemispheres 99.7
1927 Female, age 91, both hemispheres 99.3
Entorhinal gyrus
nTPM: 119.4
2764 Male, age 80, right hemisphere 139.6
2613 Female, age 94, left hemisphere 131.9
1938 Female, age 85, left hemisphere 123.5
2117 Female, age 91, right hemisphere 114.1
1787 Male, age 76, left hemisphere 106.6
2686 Male, age 75, right hemisphere 100.9
Hippocampus, CA1
nTPM: 107.0
2749 Male, age 80, left hemisphere 133.3
1873 Female, age 85, both hemispheres 115.9
2082 Female, age 91, right hemisphere 99.5
2527 Male, age 74, both hemispheres 93.1
2045 Male, age 76, both hemispheres 92.9
Hippocampus, CA2
nTPM: 106.3
1963 Male, age 80, left hemisphere 128.2
1892 Male, age 76, both hemispheres 112.0
2437 Female, age 94, left hemisphere 104.6
2249 Male, age 74, both hemispheres 100.6
1940 Female, age 85, left hemisphere 96.8
2113 Female, age 91, right hemisphere 95.9
Hippocampus, CA3
nTPM: 98.3
1891 Female, age 85, both hemispheres 116.2
1867 Male, age 76, both hemispheres 113.0
2620 Female, age 94, left hemisphere 100.9
2137 Male, age 80, left hemisphere 98.3
2436 Male, age 74, both hemispheres 83.9
2861 Female, age 67, both hemispheres 77.5
Parahippocampal cortex
nTPM: 111.9
1850 Male, age 80, both hemispheres 148.8
1990 Female, age 91, right hemisphere 124.1
2532 Female, age 72, left hemisphere 118.5
1933 Female, age 85, both hemispheres 116.4
2693 Female, age 94, both hemispheres 113.8
2250 Female, age 67, right hemisphere 103.6
2692 Male, age 74, both hemispheres 101.9
2245 Female, age 91, both hemispheres 100.2
2018 Male, age 76, both hemispheres 97.3
2622 Female, age 67, right hemisphere 94.1
Perirhinal gyrus
nTPM: 119.7
1794 Male, age 80, right hemisphere 129.9
1847 Female, age 91, left hemisphere 125.7
1841 Female, age 85, right hemisphere 123.2
2521 Female, age 94, right hemisphere 119.5
2848 Male, age 76, right hemisphere 100.2
Subiculum
nTPM: 111.8
1901 Male, age 80, both hemispheres 128.2
1977 Female, age 85, both hemispheres 123.6
2438 Female, age 94, left hemisphere 118.3
2042 Male, age 76, both hemispheres 111.7
2619 Male, age 74, both hemispheres 99.8
2729 Female, age 91, right hemisphere 89.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.9
Samples: 197

Max nTPM: 30.8
Min nTPM: 3.1
Std nTPM: 4.7
Median nTPM: 13.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 30.8
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 26.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 25.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 24.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 24.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 24.3
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 23.8
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 23.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 23.3
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 23.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 22.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 180.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 180.5
FF:10169-103B7 60 years, female 205.6
FF:10153-102I9 76 years, female 155.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 79.9
Pig sample Sample description nTPM
Subiculum
nTPM: 73.3
Samples: 4

Max nTPM: 88.6
Min nTPM: 65.5
Sample A Female 88.6
Sample B Female 65.5
Sample C Male 72.5
Sample D Male 66.6
Dorsal hippocampus
nTPM: 78.1
Samples: 4

Max nTPM: 83.6
Min nTPM: 66.3
Sample A Female 83.2
Sample B Female 79.2
Sample C Male 83.6
Sample D Male 66.3
Entorhinal cortex
nTPM: 79.9
Samples: 4

Max nTPM: 82.8
Min nTPM: 75.4
Sample A Female 81.7
Sample B Female 75.4
Sample C Male 79.6
Sample D Male 82.8
Ventral hippocampus
nTPM: 69.8
Samples: 4

Max nTPM: 83.5
Min nTPM: 59.4
Sample A Female 68.3
Sample B Female 59.4
Sample C Male 68.0
Sample D Male 83.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.1
Samples: 4

Max nTPM: 40.0
Min nTPM: 29.3
Sample A Male 32.7
Sample B Male 30.3
Sample C Female 29.3
Sample D Female 40.0
Hippocampal formation
nTPM: 25.4
Samples: 4

Max nTPM: 29.5
Min nTPM: 21.0
Sample A Male 22.3
Sample B Male 28.9
Sample C Female 29.5
Sample D Female 21.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.5
70230902 Antisense, RP_050524_04_G07, Mouse strain C57BL/6J (56 days, male) 6.5

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