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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
193.7
nTPM
FANTOM5:
391.0
Scaled Tags Per Million
Pig:
74.9
nTPM
Allen mouse:
2.8
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
193.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 134.9
2188
Female, age 91, both hemispheres
160.7
2090
Male, age 80, both hemispheres
128.6
2301
Female, age 85, both hemispheres
125.5
1984
Male, age 76, both hemispheres
124.7
Dorsal cochlear nucleus nTPM: 121.8
2802
Male, age 74, right hemisphere
135.3
2058
Male, age 76, both hemispheres
128.5
2187
Female, age 91, both hemispheres
124.1
2378
Male, age 80, both hemispheres
115.5
2370
Male, age 61, both hemispheres
105.4
Dorsal tegmental nucleus nTPM: 126.8
2083
Male, age 80, both hemispheres
135.3
2326
Male, age 74, both hemispheres
134.6
1936
Male, age 76, left hemisphere
123.8
2358
Male, age 61, both hemispheres
113.4
Dorsolateral tegmental area nTPM: 124.1
2751
Female, age 85, both hemispheres
142.7
2654
Male, age 80, both hemispheres
135.2
2360
Male, age 74, both hemispheres
115.3
2141
Male, age 76, both hemispheres
114.4
2337
Male, age 61, both hemispheres
113.0
Kolliker-Fuse nucleus nTPM: 163.3
2793
Female, age 91, left hemisphere
197.0
2315
Male, age 76, right hemisphere
147.0
2163
Male, age 80, both hemispheres
146.0
Lateral lemniscal nuclei nTPM: 192.4
2453
Male, age 74, right hemisphere
217.9
2320
Female, age 91, left hemisphere
210.0
2036
Male, age 80, both hemispheres
199.4
2169
Male, age 76, both hemispheres
180.5
2746
Female, age 85, left hemisphere
154.2
Lateral parabrachial nucleus nTPM: 152.1
2139
Female, age 85, right hemisphere
160.8
2790
Male, age 61, both hemispheres
155.1
2792
Male, age 76, both hemispheres
154.5
2013
Male, age 80, both hemispheres
137.9
Lateral vestibular nucleus nTPM: 124.1
2184
Male, age 76, both hemispheres
136.7
2311
Male, age 80, both hemispheres
111.6
Locus coeruleus nTPM: 169.7
2014
Male, age 55, unknown
205.3
2788
Male, age 74, unknown
181.8
2162
Male, age 80, both hemispheres
166.4
2317
Female, age 72, unknown
164.8
2123
Female, age 91, both hemispheres
162.4
2720
Male, age 74, both hemispheres
154.4
1980
Male, age 76, both hemispheres
153.3
Medial parabrachial nucleus nTPM: 134.5
2156
Male, age 61, both hemispheres
142.7
2854
Male, age 80, both hemispheres
137.6
2463
Female, age 85, right hemisphere
137.5
2170
Female, age 91, both hemispheres
127.3
2786
Male, age 76, both hemispheres
127.2
Medial periolivary nuclei nTPM: 178.1
2171
Female, age 85, both hemispheres
206.8
2063
Male, age 76, both hemispheres
192.3
2791
Male, age 74, right hemisphere
175.6
2458
Female, age 91, both hemispheres
174.0
2081
Male, age 80, both hemispheres
141.8
Motor facial nucleus nTPM: 173.6
2365
Male, age 74, right hemisphere
194.6
2795
Female, age 91, both hemispheres
182.1
2062
Male, age 76, both hemispheres
181.0
2327
Male, age 80, both hemispheres
175.9
2697
Female, age 85, both hemispheres
161.1
2126
Male, age 61, both hemispheres
146.8
Motor trigeminal nucleus nTPM: 146.3
2560
Male, age 74, both hemispheres
176.0
2079
Male, age 80, both hemispheres
170.3
2309
Male, age 76, both hemispheres
136.2
2321
Female, age 91, both hemispheres
129.6
2335
Male, age 61, both hemispheres
119.4
Nuclei of the trapezoid body nTPM: 191.4
2159
Male, age 61, both hemispheres
213.4
2735
Female, age 85, both hemispheres
211.2
2368
Female, age 91, both hemispheres
192.4
1983
Male, age 76, both hemispheres
173.7
2166
Male, age 80, both hemispheres
166.5
Nucleus raphe magnus nTPM: 193.7
2160
Male, age 61, both hemispheres
253.1
2455
Male, age 74, both hemispheres
221.9
2172
Female, age 85, both hemispheres
200.2
2328
Male, age 80, both hemispheres
174.8
2459
Female, age 91, both hemispheres
165.1
2051
Male, age 76, both hemispheres
146.9
Paramedian reticular nucleus nTPM: 168.2
2050
Female, age 85, both hemispheres
179.2
2313
Male, age 61, both hemispheres
167.5
2057
Male, age 80, both hemispheres
164.9
2052
Male, age 76, both hemispheres
161.2
Pedunculopontine tegmental nucleus nTPM: 143.1
2338
Male, age 61, both hemispheres
153.5
2334
Male, age 80, both hemispheres
142.0
1921
Female, age 85, both hemispheres
133.7
Pontine nuclei nTPM: 191.7
2727
Male, age 61, right hemisphere
264.4
1863
Male, age 55, unknown
204.6
2109
Female, age 72, unknown
203.9
2454
Male, age 74, left hemisphere
191.7
2787
Female, age 85, both hemispheres
190.3
1968
Male, age 76, left hemisphere
167.9
2319
Female, age 91, both hemispheres
165.4
2115
Male, age 80, left hemisphere
145.2
Pontine raphe nucleus nTPM: 156.4
2122
Female, age 85, midline
181.9
2853
Male, age 76, midline
130.9
Posteroventral cochlear nucleus nTPM: 139.4
2752
Female, age 85, both hemispheres
155.7
2135
Female, age 91, both hemispheres
148.5
2070
Male, age 76, both hemispheres
144.8
2341
Male, age 80, both hemispheres
133.4
2371
Male, age 61, both hemispheres
114.7
Principal sensory trigeminal nucleus nTPM: 182.3
2158
Male, age 61, both hemispheres
241.0
2008
Male, age 80, left hemisphere
186.8
2367
Female, age 91, left hemisphere
172.1
2324
Male, age 76, both hemispheres
129.3
Reticular pontine nucleus, caudal nTPM: 168.5
2457
Female, age 91, both hemispheres
188.5
2092
Male, age 76, both hemispheres
168.4
2332
Male, age 80, right hemisphere
163.6
2559
Male, age 74, both hemispheres
153.3
Reticular pontine nucleus, oral nTPM: 164.6
2366
Female, age 91, both hemispheres
210.1
2361
Male, age 74, both hemispheres
172.9
2012
Female, age 85, both hemispheres
167.7
1939
Male, age 80, both hemispheres
140.9
2167
Male, age 76, both hemispheres
131.2
Reticulotegmental nucleus nTPM: 143.3
2325
Male, age 76, both hemispheres
155.9
2322
Female, age 91, both hemispheres
143.1
2452
Male, age 74, both hemispheres
141.8
2333
Male, age 80, both hemispheres
132.2
Spinal trigeminal nucleus, oral nTPM: 128.4
2737
Female, age 85, both hemispheres
135.4
2164
Male, age 80, both hemispheres
131.3
1978
Male, age 76, both hemispheres
118.6
Subcoeruleus area nTPM: 140.3
1958
Male, age 80, both hemispheres
159.1
2089
Male, age 76, left hemisphere
152.4
2369
Female, age 85, left hemisphere
141.1
2451
Male, age 74, both hemispheres
125.8
2323
Female, age 91, left hemisphere
122.9
Superior olive nTPM: 179.1
1875
Female, age 85, both hemispheres
201.8
2020
Male, age 76, both hemispheres
191.2
2364
Male, age 74, right hemisphere
174.1
2329
Male, age 80, right hemisphere
165.2
2561
Female, age 91, both hemispheres
163.1
Ventral periolivary nuclei nTPM: 193.5
2794
Female, age 91, left hemisphere
202.2
2023
Male, age 76, both hemispheres
194.2
2165
Male, age 80, both hemispheres
192.8
2130
Female, age 85, both hemispheres
184.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 164.0
2449
Male, age 74, both hemispheres
195.5
2456
Female, age 91, both hemispheres
166.2
1959
Male, age 76, both hemispheres
164.1
2359
Male, age 61, both hemispheres
159.4
2161
Male, age 80, both hemispheres
158.6
2840
Female, age 85, both hemispheres
140.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
74.9
Pig sample
Sample description
nTPM
Pons nTPM: 74.9
Samples: 4
Max nTPM: 108.6
Min nTPM: 58.6
Sample A
Female
108.6
Sample B
Female
58.6
Sample C
Male
68.2
Sample D
Male
64.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
