HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:10.5 nTPM
HPA Brain:49.4 nTPM
GTEx:10.5 nTPM
FANTOM5:115.8 Scaled Tags Per Million
Pig:52.3 nTPM
Mouse:6.1 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA075337
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.4
Sample id Sample description nTPM
Hippocampus
nTPM: 48.2
2529 Female, age 94, left hemisphere 62.2
1911 Female, age 85, right hemisphere 49.7
2148 Female, age 91, left hemisphere 47.3
1855 Male, age 76, left hemisphere 44.5
2621 Female, age 67, right hemisphere 43.3
1898 Male, age 80, left hemisphere 41.9
Dentate gyrus
nTPM: 41.7
2528 Male, age 74, both hemispheres 54.6
2246 Female, age 85, both hemispheres 45.0
2530 Female, age 94, left hemisphere 42.1
2010 Male, age 76, both hemispheres 38.0
2531 Female, age 67, both hemispheres 36.1
1927 Female, age 91, both hemispheres 34.2
Entorhinal gyrus
nTPM: 44.7
2117 Female, age 91, right hemisphere 60.2
1787 Male, age 76, left hemisphere 46.1
2686 Male, age 75, right hemisphere 43.8
1938 Female, age 85, left hemisphere 43.1
2764 Male, age 80, right hemisphere 40.0
2613 Female, age 94, left hemisphere 35.1
Hippocampus, CA1
nTPM: 41.4
2527 Male, age 74, both hemispheres 55.4
1873 Female, age 85, both hemispheres 46.4
2082 Female, age 91, right hemisphere 45.6
2045 Male, age 76, both hemispheres 31.4
2749 Male, age 80, left hemisphere 28.1
Hippocampus, CA2
nTPM: 43.0
2249 Male, age 74, both hemispheres 50.2
2113 Female, age 91, right hemisphere 49.3
1963 Male, age 80, left hemisphere 45.1
1940 Female, age 85, left hemisphere 43.2
2437 Female, age 94, left hemisphere 41.5
1892 Male, age 76, both hemispheres 28.9
Hippocampus, CA3
nTPM: 39.2
1891 Female, age 85, both hemispheres 47.2
2861 Female, age 67, both hemispheres 44.4
2436 Male, age 74, both hemispheres 39.9
2620 Female, age 94, left hemisphere 36.7
1867 Male, age 76, both hemispheres 35.1
2137 Male, age 80, left hemisphere 31.9
Parahippocampal cortex
nTPM: 42.9
2692 Male, age 74, both hemispheres 55.4
2250 Female, age 67, right hemisphere 48.7
2622 Female, age 67, right hemisphere 47.3
1933 Female, age 85, both hemispheres 45.1
2018 Male, age 76, both hemispheres 41.5
2245 Female, age 91, both hemispheres 41.4
1990 Female, age 91, right hemisphere 40.4
2532 Female, age 72, left hemisphere 38.4
1850 Male, age 80, both hemispheres 36.2
2693 Female, age 94, both hemispheres 34.6
Perirhinal gyrus
nTPM: 37.5
2521 Female, age 94, right hemisphere 41.3
1847 Female, age 91, left hemisphere 39.2
1794 Male, age 80, right hemisphere 37.2
1841 Female, age 85, right hemisphere 35.4
2848 Male, age 76, right hemisphere 34.6
Subiculum
nTPM: 49.4
2619 Male, age 74, both hemispheres 61.7
2729 Female, age 91, right hemisphere 56.0
2438 Female, age 94, left hemisphere 50.3
1977 Female, age 85, both hemispheres 43.4
1901 Male, age 80, both hemispheres 43.0
2042 Male, age 76, both hemispheres 42.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.5
Samples: 197

Max nTPM: 20.5
Min nTPM: 4.2
Std nTPM: 3.3
Median nTPM: 10.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 20.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 20.4
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 19.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 18.5
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 18.0
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 17.4
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 17.2
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 17.0
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 16.7
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 16.3
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 16.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 115.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 115.8
FF:10153-102I9 76 years, female 124.7
FF:10169-103B7 60 years, female 106.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.3
Pig sample Sample description nTPM
Subiculum
nTPM: 52.3
Samples: 4

Max nTPM: 63.4
Min nTPM: 47.3
Sample A Female 47.3
Sample B Female 63.4
Sample C Male 50.0
Sample D Male 48.3
Dorsal hippocampus
nTPM: 37.9
Samples: 4

Max nTPM: 43.3
Min nTPM: 32.6
Sample A Female 37.8
Sample B Female 37.9
Sample C Male 43.3
Sample D Male 32.6
Entorhinal cortex
nTPM: 47.0
Samples: 4

Max nTPM: 52.1
Min nTPM: 42.5
Sample A Female 43.5
Sample B Female 52.1
Sample C Male 50.0
Sample D Male 42.5
Ventral hippocampus
nTPM: 48.1
Samples: 4

Max nTPM: 54.4
Min nTPM: 36.3
Sample A Female 50.3
Sample B Female 54.4
Sample C Male 51.3
Sample D Male 36.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.1
Samples: 4

Max nTPM: 12.4
Min nTPM: 3.5
Sample A Male 12.4
Sample B Male 3.5
Sample C Female 4.0
Sample D Female 4.4
Hippocampal formation
nTPM: 5.0
Samples: 4

Max nTPM: 8.3
Min nTPM: 3.8
Sample A Male 8.3
Sample B Male 4.2
Sample C Female 3.8
Sample D Female 3.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
69816643 Antisense, RP_050510_01_E08, Mouse strain C57BL/6J (56 days, male) 0.0
73949578 Antisense, RP_051219_01_H12, Mouse strain C57BL/6J (56 days, male) 0.0

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