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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
17.1
nTPM
Monaco:
11.5
nTPM
Schmiedel:
32.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
17.1
HPA sample
nTPM
gdT-cell nTPM: 11.8
Samples: 6
Max nTPM: 17.4
Min nTPM: 9.1
P10809_1007
9.1
P10809_1022
9.2
P10809_1041
17.4
P10809_1060
13.0
P10809_1077
11.5
P10809_1098
10.6
MAIT T-cell nTPM: 11.3
Samples: 6
Max nTPM: 16.5
Min nTPM: 7.3
P10809_1006
11.6
P10809_1024
7.3
P10809_1043
16.5
P10809_1062
10.8
P10809_1083
10.4
P10809_1097
11.4
Memory CD4 T-cell nTPM: 13.5
Samples: 6
Max nTPM: 19.3
Min nTPM: 10.8
P10809_1014
12.1
P10809_1026
15.5
P10809_1045
19.3
P10809_1064
11.9
P10809_1086
11.6
P10809_1113
10.8
Memory CD8 T-cell nTPM: 9.5
Samples: 5
Max nTPM: 13.2
Min nTPM: 4.2
P10809_1012
6.6
P10809_1027
10.2
P10809_1046
13.2
P10809_1065
13.2
P10809_1111
4.2
Naive CD4 T-cell nTPM: 14.9
Samples: 6
Max nTPM: 27.3
Min nTPM: 8.4
P10809_1015
17.0
P10809_1030
10.3
P10809_1049
27.3
P10809_1068
16.5
P10809_1085
8.4
P10809_1112
9.9
Naive CD8 T-cell nTPM: 14.5
Samples: 6
Max nTPM: 19.3
Min nTPM: 9.2
P10809_1016
13.7
P10809_1031
19.3
P10809_1050
18.5
P10809_1069
15.7
P10809_1087
10.4
P10809_1110
9.2
T-reg nTPM: 17.1
Samples: 6
Max nTPM: 27.6
Min nTPM: 6.7
P10809_1018
21.8
P10809_1037
6.7
P10809_1056
25.2
P10809_1075
27.6
P10809_1094
10.1
P10809_1106
11.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
11.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 7.5
Samples: 4
Max nTPM: 14.1
Min nTPM: 1.7
RHH5202_R3573
1.7
RHH5230_R3602
4.3
RHH5259_R3631
10.0
RHH5288_R3660
14.1
Effector memory CD8 T-cell nTPM: 8.2
Samples: 4
Max nTPM: 13.2
Min nTPM: 5.4
RHH5203_R3574
13.2
RHH5231_R3603
8.2
RHH5260_R3632
5.4
RHH5289_R3661
5.8
MAIT T-cell nTPM: 7.9
Samples: 4
Max nTPM: 11.3
Min nTPM: 2.0
RHH5233_R3605
8.2
RHH5205_R3576
2.0
RHH5262_R3634
10.2
RHH5297_R3663
11.3
Memory CD4 T-cell TFH nTPM: 7.5
Samples: 4
Max nTPM: 12.3
Min nTPM: 1.6
RHH5300_R3666
1.6
RHH5236_R3608
10.4
RHH5265_R3637
5.5
RHH5208_R3579
12.3
Memory CD4 T-cell Th1 nTPM: 6.8
Samples: 4
Max nTPM: 14.4
Min nTPM: 3.1
RHH5210_R3581
3.1
RHH5302_R3668
14.4
RHH5238_R3610
3.3
RHH5267_R3639
6.2
Memory CD4 T-cell Th1/Th17 nTPM: 4.6
Samples: 4
Max nTPM: 7.8
Min nTPM: 1.4
RHH5303_R3669
4.3
RHH5211_R3582
4.8
RHH5239_R3611
1.4
RHH5268_R3640
7.8
Memory CD4 T-cell Th17 nTPM: 6.6
Samples: 4
Max nTPM: 10.9
Min nTPM: 2.3
RHH5304_R3670
10.9
RHH5212_R3583
7.6
RHH5240_R3612
5.5
RHH5269_R3641
2.3
Memory CD4 T-cell Th2 nTPM: 11.1
Samples: 4
Max nTPM: 18.5
Min nTPM: 3.4
RHH5305_R3671
18.5
RHH5213_R3584
3.4
RHH5241_R3613
16.5
RHH5270_R3642
5.9
Naive CD4 T-cell nTPM: 8.4
Samples: 4
Max nTPM: 14.3
Min nTPM: 3.7
RHH5306_R3672
8.0
RHH5214_R3585
3.7
RHH5242_R3614
14.3
RHH5271_R3643
7.5
Naive CD8 T-cell nTPM: 5.1
Samples: 4
Max nTPM: 8.5
Min nTPM: 2.2
RHH5201_R3572
2.2
RHH5229_R3601
3.9
RHH5258_R3630
5.8
RHH5287_R3659
8.5
Non-Vd2 gdTCR nTPM: 6.5
Samples: 4
Max nTPM: 9.4
Min nTPM: 1.8
RHH5235_R3607
9.4
RHH5264_R3636
7.7
RHH5207_R3578
1.8
RHH5299_R3665
7.0
T-reg nTPM: 11.6
Samples: 4
Max nTPM: 16.1
Min nTPM: 4.6
RHH5301_R3667
16.1
RHH5237_R3609
15.7
RHH5266_R3638
4.6
RHH5209_R3580
9.8
Terminal effector memory CD4 T-cell nTPM: 3.9
Samples: 2
Max nTPM: 6.3
Min nTPM: 1.4
RHH5243_R3615
1.4
RHH5272_R3644
6.3
Terminal effector memory CD8 T-cell nTPM: 5.5
Samples: 4
Max nTPM: 12.1
Min nTPM: 2.5
RHH5232_R3604
2.5
RHH5204_R3575
12.1
RHH5261_R3633
4.4
RHH5296_R3662
3.0
Vd2 gdTCR nTPM: 10.8
Samples: 4
Max nTPM: 28.4
Min nTPM: 4.4
RHH5234_R3606
4.4
RHH5206_R3577
28.4
RHH5263_R3635
4.5
RHH5298_R3664
5.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
