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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
203.5
nTPM
Monaco:
61.8
nTPM
Schmiedel:
20.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
203.5
HPA sample
nTPM
gdT-cell nTPM: 150.7
Samples: 6
Max nTPM: 180.9
Min nTPM: 104.2
P10809_1007
104.2
P10809_1022
143.3
P10809_1041
164.7
P10809_1060
143.9
P10809_1077
180.9
P10809_1098
167.3
MAIT T-cell nTPM: 138.7
Samples: 6
Max nTPM: 204.4
Min nTPM: 79.6
P10809_1006
79.6
P10809_1024
126.9
P10809_1043
131.1
P10809_1062
139.1
P10809_1083
151.2
P10809_1097
204.4
Memory CD4 T-cell nTPM: 173.1
Samples: 6
Max nTPM: 220.2
Min nTPM: 110.8
P10809_1014
110.8
P10809_1026
154.6
P10809_1045
153.1
P10809_1064
220.2
P10809_1086
205.0
P10809_1113
194.7
Memory CD8 T-cell nTPM: 163.6
Samples: 5
Max nTPM: 205.2
Min nTPM: 100.8
P10809_1012
100.8
P10809_1027
162.3
P10809_1046
145.3
P10809_1065
205.2
P10809_1111
204.2
Naive CD4 T-cell nTPM: 145.1
Samples: 6
Max nTPM: 165.8
Min nTPM: 122.8
P10809_1015
122.8
P10809_1030
133.2
P10809_1049
156.1
P10809_1068
165.8
P10809_1085
157.2
P10809_1112
135.2
Naive CD8 T-cell nTPM: 160.4
Samples: 6
Max nTPM: 216.7
Min nTPM: 118.9
P10809_1016
118.9
P10809_1031
155.9
P10809_1050
145.1
P10809_1069
161.3
P10809_1087
216.7
P10809_1110
164.5
T-reg nTPM: 203.5
Samples: 6
Max nTPM: 260.2
Min nTPM: 156.2
P10809_1018
156.2
P10809_1037
215.9
P10809_1056
229.1
P10809_1075
188.7
P10809_1094
170.7
P10809_1106
260.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
61.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 38.7
Samples: 4
Max nTPM: 50.8
Min nTPM: 29.3
RHH5202_R3573
29.3
RHH5230_R3602
30.7
RHH5259_R3631
44.0
RHH5288_R3660
50.8
Effector memory CD8 T-cell nTPM: 40.8
Samples: 4
Max nTPM: 53.2
Min nTPM: 24.8
RHH5203_R3574
35.6
RHH5231_R3603
53.2
RHH5260_R3632
49.5
RHH5289_R3661
24.8
MAIT T-cell nTPM: 27.1
Samples: 4
Max nTPM: 30.7
Min nTPM: 21.6
RHH5233_R3605
29.9
RHH5205_R3576
26.2
RHH5262_R3634
30.7
RHH5297_R3663
21.6
Memory CD4 T-cell TFH nTPM: 42.6
Samples: 4
Max nTPM: 65.3
Min nTPM: 27.1
RHH5300_R3666
39.5
RHH5236_R3608
65.3
RHH5265_R3637
27.1
RHH5208_R3579
38.4
Memory CD4 T-cell Th1 nTPM: 44.0
Samples: 4
Max nTPM: 57.3
Min nTPM: 24.9
RHH5210_R3581
24.9
RHH5302_R3668
48.0
RHH5238_R3610
45.9
RHH5267_R3639
57.3
Memory CD4 T-cell Th1/Th17 nTPM: 33.1
Samples: 4
Max nTPM: 43.4
Min nTPM: 23.1
RHH5303_R3669
35.5
RHH5211_R3582
30.3
RHH5239_R3611
23.1
RHH5268_R3640
43.4
Memory CD4 T-cell Th17 nTPM: 40.9
Samples: 4
Max nTPM: 60.2
Min nTPM: 24.8
RHH5304_R3670
60.2
RHH5212_R3583
34.7
RHH5240_R3612
43.8
RHH5269_R3641
24.8
Memory CD4 T-cell Th2 nTPM: 37.3
Samples: 4
Max nTPM: 54.4
Min nTPM: 27.9
RHH5305_R3671
54.4
RHH5213_R3584
32.0
RHH5241_R3613
27.9
RHH5270_R3642
34.8
Naive CD4 T-cell nTPM: 33.7
Samples: 4
Max nTPM: 43.9
Min nTPM: 21.5
RHH5306_R3672
37.7
RHH5214_R3585
43.9
RHH5242_R3614
21.5
RHH5271_R3643
31.8
Naive CD8 T-cell nTPM: 35.8
Samples: 4
Max nTPM: 52.7
Min nTPM: 24.3
RHH5201_R3572
24.3
RHH5229_R3601
38.8
RHH5258_R3630
52.7
RHH5287_R3659
27.4
Non-Vd2 gdTCR nTPM: 51.3
Samples: 4
Max nTPM: 64.3
Min nTPM: 42.6
RHH5235_R3607
54.8
RHH5264_R3636
43.6
RHH5207_R3578
42.6
RHH5299_R3665
64.3
T-reg nTPM: 37.3
Samples: 4
Max nTPM: 41.4
Min nTPM: 28.3
RHH5301_R3667
40.4
RHH5237_R3609
28.3
RHH5266_R3638
41.4
RHH5209_R3580
39.0
Terminal effector memory CD4 T-cell nTPM: 40.3
Samples: 2
Max nTPM: 42.6
Min nTPM: 37.9
RHH5243_R3615
42.6
RHH5272_R3644
37.9
Terminal effector memory CD8 T-cell nTPM: 61.9
Samples: 4
Max nTPM: 103.7
Min nTPM: 25.7
RHH5232_R3604
25.7
RHH5204_R3575
103.7
RHH5261_R3633
61.3
RHH5296_R3662
56.7
Vd2 gdTCR nTPM: 57.8
Samples: 4
Max nTPM: 103.6
Min nTPM: 32.6
RHH5234_R3606
32.6
RHH5206_R3577
103.6
RHH5263_R3635
39.7
RHH5298_R3664
55.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
