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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
205.2
nTPM
FANTOM5:
59.6
Scaled Tags Per Million
Pig:
52.0
nTPM
Allen mouse:
3.4
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
205.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 178.1
2090
Male, age 80, both hemispheres
225.9
2188
Female, age 91, both hemispheres
179.2
2301
Female, age 85, both hemispheres
156.6
1984
Male, age 76, both hemispheres
150.7
Dorsal cochlear nucleus nTPM: 174.6
2378
Male, age 80, both hemispheres
209.9
2370
Male, age 61, both hemispheres
174.8
2802
Male, age 74, right hemisphere
174.6
2187
Female, age 91, both hemispheres
157.8
2058
Male, age 76, both hemispheres
155.8
Dorsal tegmental nucleus nTPM: 166.9
1936
Male, age 76, left hemisphere
185.1
2326
Male, age 74, both hemispheres
177.4
2083
Male, age 80, both hemispheres
156.3
2358
Male, age 61, both hemispheres
148.9
Dorsolateral tegmental area nTPM: 180.0
2337
Male, age 61, both hemispheres
210.8
2360
Male, age 74, both hemispheres
186.2
2141
Male, age 76, both hemispheres
174.0
2751
Female, age 85, both hemispheres
165.1
2654
Male, age 80, both hemispheres
163.8
Kolliker-Fuse nucleus nTPM: 160.7
2163
Male, age 80, both hemispheres
172.7
2793
Female, age 91, left hemisphere
171.7
2315
Male, age 76, right hemisphere
137.7
Lateral lemniscal nuclei nTPM: 154.6
2320
Female, age 91, left hemisphere
181.0
2453
Male, age 74, right hemisphere
159.6
2746
Female, age 85, left hemisphere
152.4
2169
Male, age 76, both hemispheres
145.5
2036
Male, age 80, both hemispheres
134.5
Lateral parabrachial nucleus nTPM: 181.8
2792
Male, age 76, both hemispheres
220.5
2790
Male, age 61, both hemispheres
185.2
2013
Male, age 80, both hemispheres
168.1
2139
Female, age 85, right hemisphere
153.4
Lateral vestibular nucleus nTPM: 178.9
2311
Male, age 80, both hemispheres
198.3
2184
Male, age 76, both hemispheres
159.6
Locus coeruleus nTPM: 176.5
2788
Male, age 74, unknown
212.4
2162
Male, age 80, both hemispheres
201.4
2014
Male, age 55, unknown
180.2
1980
Male, age 76, both hemispheres
176.8
2317
Female, age 72, unknown
169.3
2720
Male, age 74, both hemispheres
154.3
2123
Female, age 91, both hemispheres
141.1
Medial parabrachial nucleus nTPM: 165.8
2786
Male, age 76, both hemispheres
228.6
2156
Male, age 61, both hemispheres
160.4
2854
Male, age 80, both hemispheres
156.5
2170
Female, age 91, both hemispheres
143.3
2463
Female, age 85, right hemisphere
140.3
Medial periolivary nuclei nTPM: 179.3
2081
Male, age 80, both hemispheres
214.5
2791
Male, age 74, right hemisphere
210.5
2458
Female, age 91, both hemispheres
200.3
2171
Female, age 85, both hemispheres
151.9
2063
Male, age 76, both hemispheres
119.1
Motor facial nucleus nTPM: 159.5
2365
Male, age 74, right hemisphere
197.5
2697
Female, age 85, both hemispheres
177.1
2126
Male, age 61, both hemispheres
172.4
2795
Female, age 91, both hemispheres
150.9
2327
Male, age 80, both hemispheres
141.7
2062
Male, age 76, both hemispheres
117.3
Motor trigeminal nucleus nTPM: 181.9
2335
Male, age 61, both hemispheres
211.1
2309
Male, age 76, both hemispheres
188.2
2321
Female, age 91, both hemispheres
173.1
2560
Male, age 74, both hemispheres
171.5
2079
Male, age 80, both hemispheres
165.6
Nuclei of the trapezoid body nTPM: 144.1
2368
Female, age 91, both hemispheres
177.6
2166
Male, age 80, both hemispheres
171.4
2735
Female, age 85, both hemispheres
138.3
2159
Male, age 61, both hemispheres
130.0
1983
Male, age 76, both hemispheres
103.0
Nucleus raphe magnus nTPM: 151.2
2459
Female, age 91, both hemispheres
176.4
2172
Female, age 85, both hemispheres
155.8
2328
Male, age 80, both hemispheres
148.0
2455
Male, age 74, both hemispheres
145.5
2051
Male, age 76, both hemispheres
140.8
2160
Male, age 61, both hemispheres
140.6
Paramedian reticular nucleus nTPM: 168.9
2057
Male, age 80, both hemispheres
206.8
2313
Male, age 61, both hemispheres
172.4
2052
Male, age 76, both hemispheres
152.2
2050
Female, age 85, both hemispheres
144.4
Pedunculopontine tegmental nucleus nTPM: 189.1
2338
Male, age 61, both hemispheres
235.7
1921
Female, age 85, both hemispheres
180.8
2334
Male, age 80, both hemispheres
150.7
Pontine nuclei nTPM: 128.0
2115
Male, age 80, left hemisphere
202.5
2319
Female, age 91, both hemispheres
136.6
2109
Female, age 72, unknown
134.9
2454
Male, age 74, left hemisphere
130.2
1968
Male, age 76, left hemisphere
117.4
2727
Male, age 61, right hemisphere
103.5
2787
Female, age 85, both hemispheres
101.9
1863
Male, age 55, unknown
97.0
Pontine raphe nucleus nTPM: 175.3
2853
Male, age 76, midline
207.1
2122
Female, age 85, midline
143.6
Posteroventral cochlear nucleus nTPM: 205.2
2135
Female, age 91, both hemispheres
214.8
2341
Male, age 80, both hemispheres
212.3
2752
Female, age 85, both hemispheres
209.6
2371
Male, age 61, both hemispheres
196.4
2070
Male, age 76, both hemispheres
192.9
Principal sensory trigeminal nucleus nTPM: 162.7
2158
Male, age 61, both hemispheres
192.2
2324
Male, age 76, both hemispheres
158.9
2367
Female, age 91, left hemisphere
158.2
2008
Male, age 80, left hemisphere
141.3
Reticular pontine nucleus, caudal nTPM: 150.1
2559
Male, age 74, both hemispheres
184.1
2092
Male, age 76, both hemispheres
163.5
2332
Male, age 80, right hemisphere
141.1
2457
Female, age 91, both hemispheres
111.7
Reticular pontine nucleus, oral nTPM: 161.4
2361
Male, age 74, both hemispheres
201.4
2167
Male, age 76, both hemispheres
174.3
2012
Female, age 85, both hemispheres
153.5
1939
Male, age 80, both hemispheres
144.4
2366
Female, age 91, both hemispheres
133.3
Reticulotegmental nucleus nTPM: 165.6
2325
Male, age 76, both hemispheres
177.7
2333
Male, age 80, both hemispheres
168.0
2452
Male, age 74, both hemispheres
162.8
2322
Female, age 91, both hemispheres
153.8
Spinal trigeminal nucleus, oral nTPM: 171.0
1978
Male, age 76, both hemispheres
208.9
2164
Male, age 80, both hemispheres
159.1
2737
Female, age 85, both hemispheres
145.1
Subcoeruleus area nTPM: 178.9
2451
Male, age 74, both hemispheres
220.4
2369
Female, age 85, left hemisphere
184.1
2089
Male, age 76, left hemisphere
182.1
2323
Female, age 91, left hemisphere
175.5
1958
Male, age 80, both hemispheres
132.2
Superior olive nTPM: 162.6
2561
Female, age 91, both hemispheres
190.3
2364
Male, age 74, right hemisphere
166.9
2020
Male, age 76, both hemispheres
163.5
2329
Male, age 80, right hemisphere
151.5
1875
Female, age 85, both hemispheres
140.8
Ventral periolivary nuclei nTPM: 159.1
2794
Female, age 91, left hemisphere
182.3
2130
Female, age 85, both hemispheres
158.8
2165
Male, age 80, both hemispheres
148.6
2023
Male, age 76, both hemispheres
146.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 167.2
2359
Male, age 61, both hemispheres
200.5
2449
Male, age 74, both hemispheres
185.5
2456
Female, age 91, both hemispheres
171.4
1959
Male, age 76, both hemispheres
157.1
2840
Female, age 85, both hemispheres
152.3
2161
Male, age 80, both hemispheres
136.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
52.0
Pig sample
Sample description
nTPM
Pons nTPM: 52.0
Samples: 4
Max nTPM: 55.0
Min nTPM: 49.7
Sample A
Female
49.7
Sample B
Female
55.0
Sample C
Male
50.3
Sample D
Male
52.8
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
