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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
200.6
nTPM
Monaco:
113.0
nTPM
Schmiedel:
106.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
200.6
HPA sample
nTPM
gdT-cell nTPM: 145.6
Samples: 6
Max nTPM: 205.3
Min nTPM: 86.1
P10809_1007
86.1
P10809_1022
162.5
P10809_1041
205.3
P10809_1060
137.1
P10809_1077
138.6
P10809_1098
144.1
MAIT T-cell nTPM: 176.0
Samples: 6
Max nTPM: 237.4
Min nTPM: 93.9
P10809_1006
93.9
P10809_1024
237.4
P10809_1043
191.3
P10809_1062
159.2
P10809_1083
154.6
P10809_1097
219.5
Memory CD4 T-cell nTPM: 152.8
Samples: 6
Max nTPM: 196.3
Min nTPM: 106.9
P10809_1014
106.9
P10809_1026
166.9
P10809_1045
196.3
P10809_1064
149.7
P10809_1086
138.7
P10809_1113
158.0
Memory CD8 T-cell nTPM: 146.8
Samples: 5
Max nTPM: 168.0
Min nTPM: 105.6
P10809_1012
105.6
P10809_1027
142.9
P10809_1046
168.0
P10809_1065
154.0
P10809_1111
163.7
Naive CD4 T-cell nTPM: 176.0
Samples: 6
Max nTPM: 250.5
Min nTPM: 99.5
P10809_1015
99.5
P10809_1030
250.5
P10809_1049
250.2
P10809_1068
163.3
P10809_1085
135.5
P10809_1112
156.7
Naive CD8 T-cell nTPM: 200.7
Samples: 6
Max nTPM: 277.2
Min nTPM: 146.8
P10809_1016
146.8
P10809_1031
277.2
P10809_1050
225.0
P10809_1069
190.7
P10809_1087
153.5
P10809_1110
210.7
T-reg nTPM: 200.5
Samples: 6
Max nTPM: 262.0
Min nTPM: 125.2
P10809_1018
125.2
P10809_1037
197.4
P10809_1056
262.0
P10809_1075
210.4
P10809_1094
181.8
P10809_1106
225.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
113.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 101.8
Samples: 4
Max nTPM: 134.0
Min nTPM: 77.7
RHH5202_R3573
134.0
RHH5230_R3602
77.7
RHH5259_R3631
78.6
RHH5288_R3660
116.7
Effector memory CD8 T-cell nTPM: 73.8
Samples: 4
Max nTPM: 90.1
Min nTPM: 63.5
RHH5203_R3574
77.9
RHH5231_R3603
90.1
RHH5260_R3632
63.5
RHH5289_R3661
63.6
MAIT T-cell nTPM: 82.0
Samples: 4
Max nTPM: 88.9
Min nTPM: 75.6
RHH5233_R3605
88.9
RHH5205_R3576
75.6
RHH5262_R3634
83.7
RHH5297_R3663
79.7
Memory CD4 T-cell TFH nTPM: 112.7
Samples: 4
Max nTPM: 166.9
Min nTPM: 78.5
RHH5300_R3666
91.0
RHH5236_R3608
166.9
RHH5265_R3637
114.2
RHH5208_R3579
78.5
Memory CD4 T-cell Th1 nTPM: 91.6
Samples: 4
Max nTPM: 121.8
Min nTPM: 65.4
RHH5210_R3581
97.1
RHH5302_R3668
121.8
RHH5238_R3610
81.9
RHH5267_R3639
65.4
Memory CD4 T-cell Th1/Th17 nTPM: 86.4
Samples: 4
Max nTPM: 130.7
Min nTPM: 47.5
RHH5303_R3669
130.7
RHH5211_R3582
98.2
RHH5239_R3611
47.5
RHH5268_R3640
69.3
Memory CD4 T-cell Th17 nTPM: 65.0
Samples: 4
Max nTPM: 96.4
Min nTPM: 44.3
RHH5304_R3670
67.8
RHH5212_R3583
96.4
RHH5240_R3612
51.5
RHH5269_R3641
44.3
Memory CD4 T-cell Th2 nTPM: 90.0
Samples: 4
Max nTPM: 117.7
Min nTPM: 65.5
RHH5305_R3671
83.2
RHH5213_R3584
93.7
RHH5241_R3613
117.7
RHH5270_R3642
65.5
Naive CD4 T-cell nTPM: 107.8
Samples: 4
Max nTPM: 140.7
Min nTPM: 85.1
RHH5306_R3672
112.0
RHH5214_R3585
140.7
RHH5242_R3614
93.5
RHH5271_R3643
85.1
Naive CD8 T-cell nTPM: 113.0
Samples: 4
Max nTPM: 126.7
Min nTPM: 89.5
RHH5201_R3572
126.7
RHH5229_R3601
89.5
RHH5258_R3630
120.7
RHH5287_R3659
115.0
Non-Vd2 gdTCR nTPM: 79.2
Samples: 4
Max nTPM: 104.7
Min nTPM: 62.5
RHH5235_R3607
62.5
RHH5264_R3636
104.7
RHH5207_R3578
65.2
RHH5299_R3665
84.5
T-reg nTPM: 101.0
Samples: 4
Max nTPM: 134.3
Min nTPM: 79.9
RHH5301_R3667
108.4
RHH5237_R3609
134.3
RHH5266_R3638
81.3
RHH5209_R3580
79.9
Terminal effector memory CD4 T-cell nTPM: 69.3
Samples: 2
Max nTPM: 86.1
Min nTPM: 52.4
RHH5243_R3615
52.4
RHH5272_R3644
86.1
Terminal effector memory CD8 T-cell nTPM: 88.1
Samples: 4
Max nTPM: 134.6
Min nTPM: 51.8
RHH5232_R3604
95.4
RHH5204_R3575
134.6
RHH5261_R3633
51.8
RHH5296_R3662
70.6
Vd2 gdTCR nTPM: 96.9
Samples: 4
Max nTPM: 135.6
Min nTPM: 49.5
RHH5234_R3606
76.5
RHH5206_R3577
125.8
RHH5263_R3635
49.5
RHH5298_R3664
135.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
