HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:65.2 nTPM
HPA Brain:48.1 nTPM
GTEx:65.2 nTPM
FANTOM5:41.5 Scaled Tags Per Million
Pig:65.3 nTPM
Mouse:145.2 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038970
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.1
Sample id Sample description nTPM
Hippocampus
nTPM: 33.4
1898 Male, age 80, left hemisphere 44.6
2621 Female, age 67, right hemisphere 35.1
2148 Female, age 91, left hemisphere 32.1
2529 Female, age 94, left hemisphere 31.6
1911 Female, age 85, right hemisphere 31.0
1855 Male, age 76, left hemisphere 26.2
Dentate gyrus
nTPM: 33.1
1927 Female, age 91, both hemispheres 43.2
2531 Female, age 67, both hemispheres 37.0
2246 Female, age 85, both hemispheres 32.5
2530 Female, age 94, left hemisphere 31.4
2528 Male, age 74, both hemispheres 28.0
2010 Male, age 76, both hemispheres 26.4
Entorhinal gyrus
nTPM: 39.0
2764 Male, age 80, right hemisphere 44.9
2686 Male, age 75, right hemisphere 42.0
1938 Female, age 85, left hemisphere 41.8
2613 Female, age 94, left hemisphere 39.4
1787 Male, age 76, left hemisphere 37.3
2117 Female, age 91, right hemisphere 28.4
Hippocampus, CA1
nTPM: 38.5
2749 Male, age 80, left hemisphere 66.7
2527 Male, age 74, both hemispheres 36.3
1873 Female, age 85, both hemispheres 31.5
2082 Female, age 91, right hemisphere 29.5
2045 Male, age 76, both hemispheres 28.6
Hippocampus, CA2
nTPM: 34.5
1963 Male, age 80, left hemisphere 43.3
1892 Male, age 76, both hemispheres 40.5
2437 Female, age 94, left hemisphere 32.3
1940 Female, age 85, left hemisphere 32.0
2113 Female, age 91, right hemisphere 31.3
2249 Male, age 74, both hemispheres 27.6
Hippocampus, CA3
nTPM: 37.5
2137 Male, age 80, left hemisphere 52.3
2620 Female, age 94, left hemisphere 47.4
1867 Male, age 76, both hemispheres 38.1
2861 Female, age 67, both hemispheres 34.2
1891 Female, age 85, both hemispheres 28.2
2436 Male, age 74, both hemispheres 24.6
Parahippocampal cortex
nTPM: 38.7
1850 Male, age 80, both hemispheres 47.7
1990 Female, age 91, right hemisphere 41.7
2532 Female, age 72, left hemisphere 41.0
1933 Female, age 85, both hemispheres 39.0
2245 Female, age 91, both hemispheres 38.8
2693 Female, age 94, both hemispheres 38.5
2250 Female, age 67, right hemisphere 37.8
2692 Male, age 74, both hemispheres 36.2
2622 Female, age 67, right hemisphere 34.5
2018 Male, age 76, both hemispheres 31.6
Perirhinal gyrus
nTPM: 48.1
1794 Male, age 80, right hemisphere 56.7
1847 Female, age 91, left hemisphere 54.8
1841 Female, age 85, right hemisphere 50.6
2848 Male, age 76, right hemisphere 39.6
2521 Female, age 94, right hemisphere 38.9
Subiculum
nTPM: 32.7
1977 Female, age 85, both hemispheres 42.0
1901 Male, age 80, both hemispheres 40.1
2438 Female, age 94, left hemisphere 35.5
2619 Male, age 74, both hemispheres 30.2
2042 Male, age 76, both hemispheres 25.4
2729 Female, age 91, right hemisphere 23.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 65.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 65.2
Samples: 197

Max nTPM: 202.5
Min nTPM: 17.1
Std nTPM: 28.0
Median nTPM: 60.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 202.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 161.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 153.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 144.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 143.9
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 125.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 124.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 123.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 123.5
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 122.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 122.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.5
FF:10169-103B7 60 years, female 41.5
FF:10153-102I9 76 years, female 41.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 65.3
Pig sample Sample description nTPM
Subiculum
nTPM: 55.7
Samples: 4

Max nTPM: 77.5
Min nTPM: 44.6
Sample A Female 77.5
Sample B Female 49.5
Sample C Male 51.1
Sample D Male 44.6
Dorsal hippocampus
nTPM: 65.3
Samples: 4

Max nTPM: 80.3
Min nTPM: 56.1
Sample A Female 80.3
Sample B Female 67.6
Sample C Male 57.3
Sample D Male 56.1
Entorhinal cortex
nTPM: 62.2
Samples: 4

Max nTPM: 70.0
Min nTPM: 48.5
Sample A Female 63.7
Sample B Female 66.4
Sample C Male 70.0
Sample D Male 48.5
Ventral hippocampus
nTPM: 61.2
Samples: 4

Max nTPM: 75.7
Min nTPM: 47.3
Sample A Female 53.1
Sample B Female 47.3
Sample C Male 75.7
Sample D Male 68.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 145.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 145.3
Samples: 4

Max nTPM: 151.1
Min nTPM: 137.9
Sample A Male 137.9
Sample B Male 151.1
Sample C Female 149.5
Sample D Female 142.5
Hippocampal formation
nTPM: 129.8
Samples: 4

Max nTPM: 158.0
Min nTPM: 113.7
Sample A Male 158.0
Sample B Male 113.7
Sample C Female 118.4
Sample D Female 128.9

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