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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
183.5
nTPM
FANTOM5:
64.8
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max nTPM
183.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 140.5
2301
Female, age 85, both hemispheres
152.2
2188
Female, age 91, both hemispheres
141.9
2090
Male, age 80, both hemispheres
141.0
1984
Male, age 76, both hemispheres
126.9
Dorsal cochlear nucleus nTPM: 148.4
2187
Female, age 91, both hemispheres
173.8
2370
Male, age 61, both hemispheres
158.3
2802
Male, age 74, right hemisphere
154.0
2058
Male, age 76, both hemispheres
142.5
2378
Male, age 80, both hemispheres
113.6
Dorsal tegmental nucleus nTPM: 165.8
2083
Male, age 80, both hemispheres
195.1
1936
Male, age 76, left hemisphere
164.7
2326
Male, age 74, both hemispheres
156.6
2358
Male, age 61, both hemispheres
146.6
Dorsolateral tegmental area nTPM: 166.6
2654
Male, age 80, both hemispheres
197.8
2337
Male, age 61, both hemispheres
170.3
2751
Female, age 85, both hemispheres
170.0
2141
Male, age 76, both hemispheres
148.9
2360
Male, age 74, both hemispheres
146.1
Kolliker-Fuse nucleus nTPM: 169.1
2315
Male, age 76, right hemisphere
184.2
2163
Male, age 80, both hemispheres
172.3
2793
Female, age 91, left hemisphere
150.8
Lateral lemniscal nuclei nTPM: 143.5
2169
Male, age 76, both hemispheres
175.6
2746
Female, age 85, left hemisphere
163.2
2453
Male, age 74, right hemisphere
153.7
2320
Female, age 91, left hemisphere
130.6
2036
Male, age 80, both hemispheres
94.4
Lateral parabrachial nucleus nTPM: 155.9
2139
Female, age 85, right hemisphere
170.9
2013
Male, age 80, both hemispheres
164.6
2790
Male, age 61, both hemispheres
149.3
2792
Male, age 76, both hemispheres
138.7
Lateral vestibular nucleus nTPM: 176.7
2311
Male, age 80, both hemispheres
181.3
2184
Male, age 76, both hemispheres
172.1
Locus coeruleus nTPM: 171.6
2123
Female, age 91, both hemispheres
212.5
1980
Male, age 76, both hemispheres
196.6
2014
Male, age 55, unknown
183.5
2162
Male, age 80, both hemispheres
172.6
2317
Female, age 72, unknown
167.6
2720
Male, age 74, both hemispheres
150.6
2788
Male, age 74, unknown
117.9
Medial parabrachial nucleus nTPM: 180.7
2170
Female, age 91, both hemispheres
231.8
2463
Female, age 85, right hemisphere
190.7
2156
Male, age 61, both hemispheres
170.6
2786
Male, age 76, both hemispheres
162.2
2854
Male, age 80, both hemispheres
148.3
Medial periolivary nuclei nTPM: 153.7
2063
Male, age 76, both hemispheres
197.6
2171
Female, age 85, both hemispheres
170.8
2081
Male, age 80, both hemispheres
138.3
2791
Male, age 74, right hemisphere
136.0
2458
Female, age 91, both hemispheres
125.7
Motor facial nucleus nTPM: 154.6
2062
Male, age 76, both hemispheres
211.5
2126
Male, age 61, both hemispheres
174.3
2795
Female, age 91, both hemispheres
147.5
2365
Male, age 74, right hemisphere
132.4
2327
Male, age 80, both hemispheres
132.1
2697
Female, age 85, both hemispheres
129.9
Motor trigeminal nucleus nTPM: 164.4
2335
Male, age 61, both hemispheres
208.1
2309
Male, age 76, both hemispheres
168.0
2560
Male, age 74, both hemispheres
155.7
2079
Male, age 80, both hemispheres
153.0
2321
Female, age 91, both hemispheres
137.1
Nuclei of the trapezoid body nTPM: 174.6
1983
Male, age 76, both hemispheres
218.7
2735
Female, age 85, both hemispheres
186.2
2159
Male, age 61, both hemispheres
180.7
2166
Male, age 80, both hemispheres
155.1
2368
Female, age 91, both hemispheres
132.3
Nucleus raphe magnus nTPM: 162.9
2160
Male, age 61, both hemispheres
188.9
2051
Male, age 76, both hemispheres
181.2
2172
Female, age 85, both hemispheres
171.7
2455
Male, age 74, both hemispheres
157.7
2328
Male, age 80, both hemispheres
156.8
2459
Female, age 91, both hemispheres
120.8
Paramedian reticular nucleus nTPM: 151.1
2313
Male, age 61, both hemispheres
177.6
2057
Male, age 80, both hemispheres
158.7
2050
Female, age 85, both hemispheres
158.0
2052
Male, age 76, both hemispheres
110.1
Pedunculopontine tegmental nucleus nTPM: 161.5
2334
Male, age 80, both hemispheres
170.1
1921
Female, age 85, both hemispheres
161.6
2338
Male, age 61, both hemispheres
152.8
Pontine nuclei nTPM: 182.2
2787
Female, age 85, both hemispheres
239.2
1968
Male, age 76, left hemisphere
221.5
1863
Male, age 55, unknown
215.6
2109
Female, age 72, unknown
177.5
2727
Male, age 61, right hemisphere
172.4
2115
Male, age 80, left hemisphere
149.4
2319
Female, age 91, both hemispheres
147.4
2454
Male, age 74, left hemisphere
134.3
Pontine raphe nucleus nTPM: 183.5
2122
Female, age 85, midline
191.8
2853
Male, age 76, midline
175.1
Posteroventral cochlear nucleus nTPM: 154.4
2752
Female, age 85, both hemispheres
191.7
2070
Male, age 76, both hemispheres
161.8
2371
Male, age 61, both hemispheres
158.5
2135
Female, age 91, both hemispheres
135.1
2341
Male, age 80, both hemispheres
125.1
Principal sensory trigeminal nucleus nTPM: 160.9
2158
Male, age 61, both hemispheres
195.3
2324
Male, age 76, both hemispheres
166.9
2008
Male, age 80, left hemisphere
155.2
2367
Female, age 91, left hemisphere
126.3
Reticular pontine nucleus, caudal nTPM: 158.2
2092
Male, age 76, both hemispheres
184.4
2559
Male, age 74, both hemispheres
172.9
2332
Male, age 80, right hemisphere
153.0
2457
Female, age 91, both hemispheres
122.7
Reticular pontine nucleus, oral nTPM: 151.8
1939
Male, age 80, both hemispheres
177.4
2167
Male, age 76, both hemispheres
174.3
2012
Female, age 85, both hemispheres
156.8
2366
Female, age 91, both hemispheres
140.9
2361
Male, age 74, both hemispheres
109.3
Reticulotegmental nucleus nTPM: 170.2
2452
Male, age 74, both hemispheres
190.5
2322
Female, age 91, both hemispheres
171.5
2325
Male, age 76, both hemispheres
167.9
2333
Male, age 80, both hemispheres
151.0
Spinal trigeminal nucleus, oral nTPM: 175.0
1978
Male, age 76, both hemispheres
186.2
2164
Male, age 80, both hemispheres
175.9
2737
Female, age 85, both hemispheres
162.9
Subcoeruleus area nTPM: 166.9
2451
Male, age 74, both hemispheres
186.8
2323
Female, age 91, left hemisphere
186.0
1958
Male, age 80, both hemispheres
160.5
2089
Male, age 76, left hemisphere
159.1
2369
Female, age 85, left hemisphere
142.1
Superior olive nTPM: 150.0
2020
Male, age 76, both hemispheres
170.4
1875
Female, age 85, both hemispheres
157.2
2364
Male, age 74, right hemisphere
152.3
2561
Female, age 91, both hemispheres
137.3
2329
Male, age 80, right hemisphere
132.9
Ventral periolivary nuclei nTPM: 151.2
2165
Male, age 80, both hemispheres
178.6
2130
Female, age 85, both hemispheres
159.6
2023
Male, age 76, both hemispheres
142.4
2794
Female, age 91, left hemisphere
124.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 145.6
2449
Male, age 74, both hemispheres
156.5
1959
Male, age 76, both hemispheres
156.3
2161
Male, age 80, both hemispheres
147.4
2359
Male, age 61, both hemispheres
147.2
2840
Female, age 85, both hemispheres
145.9
2456
Female, age 91, both hemispheres
120.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
The Human Protein Atlas project is funded
