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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
225.6
nTPM
FANTOM5:
149.9
Scaled Tags Per Million
Pig:
117.9
nTPM
Allen mouse:
1.3
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
225.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 124.4
2090
Male, age 80, both hemispheres
139.0
1984
Male, age 76, both hemispheres
135.8
2301
Female, age 85, both hemispheres
122.3
2188
Female, age 91, both hemispheres
100.6
Dorsal cochlear nucleus nTPM: 139.9
2058
Male, age 76, both hemispheres
157.7
2370
Male, age 61, both hemispheres
150.1
2802
Male, age 74, right hemisphere
136.2
2378
Male, age 80, both hemispheres
130.2
2187
Female, age 91, both hemispheres
125.1
Dorsal tegmental nucleus nTPM: 151.7
1936
Male, age 76, left hemisphere
173.2
2083
Male, age 80, both hemispheres
155.3
2358
Male, age 61, both hemispheres
149.9
2326
Male, age 74, both hemispheres
128.2
Dorsolateral tegmental area nTPM: 150.2
2360
Male, age 74, both hemispheres
203.0
2654
Male, age 80, both hemispheres
159.9
2141
Male, age 76, both hemispheres
142.2
2751
Female, age 85, both hemispheres
130.3
2337
Male, age 61, both hemispheres
115.5
Kolliker-Fuse nucleus nTPM: 225.6
2315
Male, age 76, right hemisphere
436.3
2163
Male, age 80, both hemispheres
163.4
2793
Female, age 91, left hemisphere
77.1
Lateral lemniscal nuclei nTPM: 99.5
2746
Female, age 85, left hemisphere
132.8
2036
Male, age 80, both hemispheres
124.6
2169
Male, age 76, both hemispheres
97.8
2453
Male, age 74, right hemisphere
87.8
2320
Female, age 91, left hemisphere
54.3
Lateral parabrachial nucleus nTPM: 183.0
2792
Male, age 76, both hemispheres
235.3
2139
Female, age 85, right hemisphere
230.3
2013
Male, age 80, both hemispheres
154.0
2790
Male, age 61, both hemispheres
112.2
Lateral vestibular nucleus nTPM: 155.8
2311
Male, age 80, both hemispheres
163.1
2184
Male, age 76, both hemispheres
148.5
Locus coeruleus nTPM: 144.4
2123
Female, age 91, both hemispheres
202.8
2317
Female, age 72, unknown
179.6
2788
Male, age 74, unknown
149.3
2014
Male, age 55, unknown
141.9
1980
Male, age 76, both hemispheres
135.9
2162
Male, age 80, both hemispheres
111.8
2720
Male, age 74, both hemispheres
89.6
Medial parabrachial nucleus nTPM: 126.7
2156
Male, age 61, both hemispheres
135.0
2854
Male, age 80, both hemispheres
132.4
2786
Male, age 76, both hemispheres
127.0
2170
Female, age 91, both hemispheres
126.4
2463
Female, age 85, right hemisphere
112.7
Medial periolivary nuclei nTPM: 136.1
2791
Male, age 74, right hemisphere
225.5
2171
Female, age 85, both hemispheres
138.3
2063
Male, age 76, both hemispheres
129.2
2081
Male, age 80, both hemispheres
113.1
2458
Female, age 91, both hemispheres
74.4
Motor facial nucleus nTPM: 116.3
2365
Male, age 74, right hemisphere
152.2
2062
Male, age 76, both hemispheres
138.2
2795
Female, age 91, both hemispheres
123.5
2126
Male, age 61, both hemispheres
111.3
2697
Female, age 85, both hemispheres
92.3
2327
Male, age 80, both hemispheres
80.2
Motor trigeminal nucleus nTPM: 104.5
2309
Male, age 76, both hemispheres
137.5
2335
Male, age 61, both hemispheres
120.4
2079
Male, age 80, both hemispheres
115.1
2560
Male, age 74, both hemispheres
77.5
2321
Female, age 91, both hemispheres
72.1
Nuclei of the trapezoid body nTPM: 122.6
1983
Male, age 76, both hemispheres
146.7
2735
Female, age 85, both hemispheres
145.1
2159
Male, age 61, both hemispheres
119.7
2166
Male, age 80, both hemispheres
103.9
2368
Female, age 91, both hemispheres
97.5
Nucleus raphe magnus nTPM: 115.6
2455
Male, age 74, both hemispheres
158.9
2160
Male, age 61, both hemispheres
133.4
2172
Female, age 85, both hemispheres
121.8
2051
Male, age 76, both hemispheres
119.7
2328
Male, age 80, both hemispheres
98.5
2459
Female, age 91, both hemispheres
61.5
Paramedian reticular nucleus nTPM: 141.2
2057
Male, age 80, both hemispheres
166.0
2052
Male, age 76, both hemispheres
137.2
2313
Male, age 61, both hemispheres
133.0
2050
Female, age 85, both hemispheres
128.6
Pedunculopontine tegmental nucleus nTPM: 125.3
2334
Male, age 80, both hemispheres
142.6
1921
Female, age 85, both hemispheres
125.5
2338
Male, age 61, both hemispheres
107.9
Pontine nuclei nTPM: 105.6
2787
Female, age 85, both hemispheres
138.2
1863
Male, age 55, unknown
137.4
2109
Female, age 72, unknown
122.2
2727
Male, age 61, right hemisphere
115.6
2115
Male, age 80, left hemisphere
111.3
1968
Male, age 76, left hemisphere
101.9
2319
Female, age 91, both hemispheres
74.8
2454
Male, age 74, left hemisphere
43.2
Pontine raphe nucleus nTPM: 136.1
2122
Female, age 85, midline
142.4
2853
Male, age 76, midline
129.8
Posteroventral cochlear nucleus nTPM: 127.1
2371
Male, age 61, both hemispheres
143.2
2752
Female, age 85, both hemispheres
137.7
2070
Male, age 76, both hemispheres
132.2
2341
Male, age 80, both hemispheres
120.4
2135
Female, age 91, both hemispheres
102.3
Principal sensory trigeminal nucleus nTPM: 116.0
2324
Male, age 76, both hemispheres
169.5
2158
Male, age 61, both hemispheres
125.7
2008
Male, age 80, left hemisphere
112.8
2367
Female, age 91, left hemisphere
56.2
Reticular pontine nucleus, caudal nTPM: 96.8
2092
Male, age 76, both hemispheres
162.8
2332
Male, age 80, right hemisphere
94.1
2457
Female, age 91, both hemispheres
71.9
2559
Male, age 74, both hemispheres
58.3
Reticular pontine nucleus, oral nTPM: 108.5
1939
Male, age 80, both hemispheres
157.2
2012
Female, age 85, both hemispheres
127.5
2167
Male, age 76, both hemispheres
125.5
2361
Male, age 74, both hemispheres
67.0
2366
Female, age 91, both hemispheres
65.1
Reticulotegmental nucleus nTPM: 115.3
2333
Male, age 80, both hemispheres
137.3
2325
Male, age 76, both hemispheres
126.2
2322
Female, age 91, both hemispheres
103.1
2452
Male, age 74, both hemispheres
94.7
Spinal trigeminal nucleus, oral nTPM: 124.1
2737
Female, age 85, both hemispheres
137.2
2164
Male, age 80, both hemispheres
126.1
1978
Male, age 76, both hemispheres
108.8
Subcoeruleus area nTPM: 113.1
1958
Male, age 80, both hemispheres
133.0
2369
Female, age 85, left hemisphere
115.9
2323
Female, age 91, left hemisphere
115.2
2451
Male, age 74, both hemispheres
102.3
2089
Male, age 76, left hemisphere
99.3
Superior olive nTPM: 121.5
2364
Male, age 74, right hemisphere
212.3
1875
Female, age 85, both hemispheres
119.6
2020
Male, age 76, both hemispheres
110.9
2329
Male, age 80, right hemisphere
90.1
2561
Female, age 91, both hemispheres
74.3
Ventral periolivary nuclei nTPM: 113.4
2130
Female, age 85, both hemispheres
140.9
2165
Male, age 80, both hemispheres
127.1
2023
Male, age 76, both hemispheres
115.3
2794
Female, age 91, left hemisphere
70.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 114.0
2840
Female, age 85, both hemispheres
134.1
1959
Male, age 76, both hemispheres
128.5
2359
Male, age 61, both hemispheres
119.1
2449
Male, age 74, both hemispheres
112.9
2161
Male, age 80, both hemispheres
109.3
2456
Female, age 91, both hemispheres
80.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
117.9
Pig sample
Sample description
nTPM
Pons nTPM: 117.9
Samples: 4
Max nTPM: 182.3
Min nTPM: 70.1
Sample A
Female
131.2
Sample B
Female
70.1
Sample C
Male
87.9
Sample D
Male
182.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
