We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
100.3
nTPM
Monaco:
46.8
nTPM
Schmiedel:
35.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
100.3
HPA sample
nTPM
gdT-cell nTPM: 40.5
Samples: 6
Max nTPM: 63.2
Min nTPM: 26.3
P10809_1007
26.3
P10809_1022
36.4
P10809_1041
63.2
P10809_1060
37.9
P10809_1077
39.9
P10809_1098
39.0
MAIT T-cell nTPM: 45.1
Samples: 6
Max nTPM: 57.6
Min nTPM: 31.5
P10809_1006
31.5
P10809_1024
57.6
P10809_1043
48.2
P10809_1062
39.4
P10809_1083
52.3
P10809_1097
41.8
Memory CD4 T-cell nTPM: 53.2
Samples: 6
Max nTPM: 64.6
Min nTPM: 37.1
P10809_1014
37.1
P10809_1026
53.1
P10809_1045
57.2
P10809_1064
64.6
P10809_1086
58.1
P10809_1113
49.3
Memory CD8 T-cell nTPM: 49.0
Samples: 5
Max nTPM: 63.4
Min nTPM: 35.7
P10809_1012
35.7
P10809_1027
50.8
P10809_1046
47.5
P10809_1065
47.5
P10809_1111
63.4
Naive CD4 T-cell nTPM: 38.2
Samples: 6
Max nTPM: 49.7
Min nTPM: 26.2
P10809_1015
26.2
P10809_1030
31.1
P10809_1049
49.7
P10809_1068
41.9
P10809_1085
46.8
P10809_1112
33.5
Naive CD8 T-cell nTPM: 45.3
Samples: 6
Max nTPM: 57.6
Min nTPM: 26.5
P10809_1016
26.5
P10809_1031
41.5
P10809_1050
49.2
P10809_1069
57.6
P10809_1087
52.7
P10809_1110
44.0
T-reg nTPM: 100.2
Samples: 6
Max nTPM: 118.9
Min nTPM: 83.0
P10809_1018
83.0
P10809_1037
90.0
P10809_1056
118.9
P10809_1075
86.8
P10809_1094
110.2
P10809_1106
112.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
46.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 36.1
Samples: 4
Max nTPM: 49.8
Min nTPM: 18.7
RHH5202_R3573
48.1
RHH5230_R3602
18.7
RHH5259_R3631
27.9
RHH5288_R3660
49.8
Effector memory CD8 T-cell nTPM: 39.7
Samples: 4
Max nTPM: 57.6
Min nTPM: 22.4
RHH5203_R3574
57.6
RHH5231_R3603
42.6
RHH5260_R3632
22.4
RHH5289_R3661
36.2
MAIT T-cell nTPM: 39.4
Samples: 4
Max nTPM: 58.4
Min nTPM: 22.1
RHH5233_R3605
42.3
RHH5205_R3576
22.1
RHH5262_R3634
34.7
RHH5297_R3663
58.4
Memory CD4 T-cell TFH nTPM: 46.9
Samples: 4
Max nTPM: 80.4
Min nTPM: 32.2
RHH5300_R3666
36.3
RHH5236_R3608
80.4
RHH5265_R3637
32.2
RHH5208_R3579
38.5
Memory CD4 T-cell Th1 nTPM: 38.9
Samples: 4
Max nTPM: 68.0
Min nTPM: 21.6
RHH5210_R3581
41.7
RHH5302_R3668
68.0
RHH5238_R3610
24.2
RHH5267_R3639
21.6
Memory CD4 T-cell Th1/Th17 nTPM: 45.8
Samples: 4
Max nTPM: 74.2
Min nTPM: 15.2
RHH5303_R3669
74.2
RHH5211_R3582
67.6
RHH5239_R3611
15.2
RHH5268_R3640
26.1
Memory CD4 T-cell Th17 nTPM: 26.4
Samples: 4
Max nTPM: 46.9
Min nTPM: 11.6
RHH5304_R3670
28.3
RHH5212_R3583
46.9
RHH5240_R3612
11.6
RHH5269_R3641
18.8
Memory CD4 T-cell Th2 nTPM: 43.8
Samples: 4
Max nTPM: 60.0
Min nTPM: 29.2
RHH5305_R3671
49.7
RHH5213_R3584
60.0
RHH5241_R3613
36.2
RHH5270_R3642
29.2
Naive CD4 T-cell nTPM: 19.8
Samples: 4
Max nTPM: 30.4
Min nTPM: 14.2
RHH5306_R3672
14.2
RHH5214_R3585
30.4
RHH5242_R3614
16.3
RHH5271_R3643
18.4
Naive CD8 T-cell nTPM: 34.8
Samples: 4
Max nTPM: 62.4
Min nTPM: 13.0
RHH5201_R3572
36.7
RHH5229_R3601
13.0
RHH5258_R3630
62.4
RHH5287_R3659
27.1
Non-Vd2 gdTCR nTPM: 38.5
Samples: 4
Max nTPM: 54.7
Min nTPM: 25.3
RHH5235_R3607
25.3
RHH5264_R3636
43.8
RHH5207_R3578
30.3
RHH5299_R3665
54.7
T-reg nTPM: 41.6
Samples: 4
Max nTPM: 54.6
Min nTPM: 25.2
RHH5301_R3667
53.7
RHH5237_R3609
54.6
RHH5266_R3638
25.2
RHH5209_R3580
32.8
Terminal effector memory CD4 T-cell nTPM: 15.7
Samples: 2
Max nTPM: 19.2
Min nTPM: 12.2
RHH5243_R3615
12.2
RHH5272_R3644
19.2
Terminal effector memory CD8 T-cell nTPM: 29.4
Samples: 4
Max nTPM: 54.9
Min nTPM: 20.1
RHH5232_R3604
20.1
RHH5204_R3575
54.9
RHH5261_R3633
21.7
RHH5296_R3662
20.8
Vd2 gdTCR nTPM: 32.1
Samples: 4
Max nTPM: 43.9
Min nTPM: 20.7
RHH5234_R3606
20.7
RHH5206_R3577
43.9
RHH5263_R3635
25.4
RHH5298_R3664
38.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
