HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:18.9 nTPM
HPA Brain:64.6 nTPM
GTEx:18.9 nTPM
FANTOM5:107.0 Scaled Tags Per Million
Pig:71.5 nTPM
Mouse:86.9 nTPM
Allen mouse:17.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.6
Sample id Sample description nTPM
Hippocampus
nTPM: 52.0
1898 Male, age 80, left hemisphere 86.1
1855 Male, age 76, left hemisphere 58.3
2621 Female, age 67, right hemisphere 48.9
1911 Female, age 85, right hemisphere 40.3
2148 Female, age 91, left hemisphere 40.2
2529 Female, age 94, left hemisphere 38.0
Dentate gyrus
nTPM: 51.5
1927 Female, age 91, both hemispheres 69.3
2010 Male, age 76, both hemispheres 66.8
2530 Female, age 94, left hemisphere 53.9
2528 Male, age 74, both hemispheres 46.4
2246 Female, age 85, both hemispheres 45.0
2531 Female, age 67, both hemispheres 27.3
Entorhinal gyrus
nTPM: 46.0
1938 Female, age 85, left hemisphere 62.4
2764 Male, age 80, right hemisphere 54.9
1787 Male, age 76, left hemisphere 43.2
2613 Female, age 94, left hemisphere 42.1
2117 Female, age 91, right hemisphere 40.1
2686 Male, age 75, right hemisphere 33.3
Hippocampus, CA1
nTPM: 64.6
2749 Male, age 80, left hemisphere 126.1
1873 Female, age 85, both hemispheres 72.7
2527 Male, age 74, both hemispheres 48.7
2082 Female, age 91, right hemisphere 41.1
2045 Male, age 76, both hemispheres 34.3
Hippocampus, CA2
nTPM: 61.2
1963 Male, age 80, left hemisphere 105.4
1892 Male, age 76, both hemispheres 85.1
2249 Male, age 74, both hemispheres 50.4
1940 Female, age 85, left hemisphere 45.4
2113 Female, age 91, right hemisphere 41.7
2437 Female, age 94, left hemisphere 39.3
Hippocampus, CA3
nTPM: 54.0
2137 Male, age 80, left hemisphere 87.0
1867 Male, age 76, both hemispheres 70.6
2436 Male, age 74, both hemispheres 50.4
1891 Female, age 85, both hemispheres 44.7
2861 Female, age 67, both hemispheres 37.8
2620 Female, age 94, left hemisphere 33.3
Parahippocampal cortex
nTPM: 46.1
1850 Male, age 80, both hemispheres 71.8
1990 Female, age 91, right hemisphere 54.3
1933 Female, age 85, both hemispheres 54.1
2245 Female, age 91, both hemispheres 47.5
2250 Female, age 67, right hemisphere 45.0
2693 Female, age 94, both hemispheres 43.1
2532 Female, age 72, left hemisphere 40.5
2692 Male, age 74, both hemispheres 39.7
2018 Male, age 76, both hemispheres 37.3
2622 Female, age 67, right hemisphere 28.0
Perirhinal gyrus
nTPM: 57.5
1847 Female, age 91, left hemisphere 74.7
1794 Male, age 80, right hemisphere 56.1
1841 Female, age 85, right hemisphere 55.6
2521 Female, age 94, right hemisphere 50.6
2848 Male, age 76, right hemisphere 50.3
Subiculum
nTPM: 43.3
1901 Male, age 80, both hemispheres 60.6
1977 Female, age 85, both hemispheres 50.3
2042 Male, age 76, both hemispheres 41.0
2438 Female, age 94, left hemisphere 37.5
2729 Female, age 91, right hemisphere 35.9
2619 Male, age 74, both hemispheres 34.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.9
Samples: 197

Max nTPM: 64.9
Min nTPM: 8.0
Std nTPM: 8.3
Median nTPM: 16.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 64.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 46.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 42.1
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 41.7
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 40.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 40.3
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 40.2
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 36.5
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 35.2
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 35.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 35.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 107.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 107.0
FF:10169-103B7 60 years, female 144.3
FF:10153-102I9 76 years, female 69.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 71.5
Pig sample Sample description nTPM
Subiculum
nTPM: 63.8
Samples: 4

Max nTPM: 69.1
Min nTPM: 56.4
Sample A Female 69.1
Sample B Female 56.4
Sample C Male 62.1
Sample D Male 67.6
Dorsal hippocampus
nTPM: 71.5
Samples: 4

Max nTPM: 90.0
Min nTPM: 46.4
Sample A Female 90.0
Sample B Female 77.4
Sample C Male 72.3
Sample D Male 46.4
Entorhinal cortex
nTPM: 54.4
Samples: 4

Max nTPM: 61.8
Min nTPM: 46.1
Sample A Female 50.7
Sample B Female 58.9
Sample C Male 61.8
Sample D Male 46.1
Ventral hippocampus
nTPM: 64.4
Samples: 4

Max nTPM: 81.8
Min nTPM: 50.9
Sample A Female 81.8
Sample B Female 50.9
Sample C Male 61.5
Sample D Male 63.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 86.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 87.0
Samples: 4

Max nTPM: 118.8
Min nTPM: 72.2
Sample A Male 77.3
Sample B Male 72.2
Sample C Female 79.5
Sample D Female 118.8
Hippocampal formation
nTPM: 84.1
Samples: 4

Max nTPM: 100.7
Min nTPM: 69.8
Sample A Male 75.4
Sample B Male 90.3
Sample C Female 100.7
Sample D Female 69.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.3
69735831 Antisense, RP_050503_03_F05, Mouse strain C57BL/6J (56 days, male) 17.3

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