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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
62.8
nTPM
Monaco:
567.2
nTPM
Schmiedel:
3111.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
62.8
HPA sample
nTPM
gdT-cell nTPM: 46.7
Samples: 6
Max nTPM: 98.0
Min nTPM: 21.4
P10809_1007
98.0
P10809_1022
31.6
P10809_1041
36.0
P10809_1060
21.4
P10809_1077
44.8
P10809_1098
48.1
MAIT T-cell nTPM: 45.9
Samples: 6
Max nTPM: 88.5
Min nTPM: 9.8
P10809_1006
69.6
P10809_1024
9.8
P10809_1043
45.5
P10809_1062
21.8
P10809_1083
40.0
P10809_1097
88.5
Memory CD4 T-cell nTPM: 46.2
Samples: 6
Max nTPM: 85.2
Min nTPM: 11.7
P10809_1014
85.2
P10809_1026
43.4
P10809_1045
60.5
P10809_1064
56.7
P10809_1086
19.9
P10809_1113
11.7
Memory CD8 T-cell nTPM: 62.8
Samples: 5
Max nTPM: 110.3
Min nTPM: 25.4
P10809_1012
83.7
P10809_1027
25.4
P10809_1046
110.3
P10809_1065
45.1
P10809_1111
49.4
Naive CD4 T-cell nTPM: 34.2
Samples: 6
Max nTPM: 59.8
Min nTPM: 22.9
P10809_1015
59.8
P10809_1030
23.2
P10809_1049
34.3
P10809_1068
23.7
P10809_1085
41.1
P10809_1112
22.9
Naive CD8 T-cell nTPM: 34.0
Samples: 6
Max nTPM: 39.5
Min nTPM: 15.2
P10809_1016
39.5
P10809_1031
34.7
P10809_1050
38.0
P10809_1069
39.5
P10809_1087
15.2
P10809_1110
36.9
T-reg nTPM: 19.5
Samples: 6
Max nTPM: 49.0
Min nTPM: 5.8
P10809_1018
16.6
P10809_1037
16.9
P10809_1056
49.0
P10809_1075
13.5
P10809_1094
5.8
P10809_1106
15.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
567.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 567.3
Samples: 4
Max nTPM: 934.9
Min nTPM: 178.3
RHH5202_R3573
283.5
RHH5230_R3602
872.3
RHH5259_R3631
934.9
RHH5288_R3660
178.3
Effector memory CD8 T-cell nTPM: 495.2
Samples: 4
Max nTPM: 1150.3
Min nTPM: 213.5
RHH5203_R3574
291.7
RHH5231_R3603
325.3
RHH5260_R3632
1150.3
RHH5289_R3661
213.5
MAIT T-cell nTPM: 388.8
Samples: 4
Max nTPM: 661.8
Min nTPM: 205.1
RHH5233_R3605
205.1
RHH5205_R3576
452.5
RHH5262_R3634
661.8
RHH5297_R3663
235.6
Memory CD4 T-cell TFH nTPM: 274.1
Samples: 4
Max nTPM: 489.2
Min nTPM: 103.4
RHH5300_R3666
296.0
RHH5236_R3608
489.2
RHH5265_R3637
103.4
RHH5208_R3579
207.9
Memory CD4 T-cell Th1 nTPM: 465.2
Samples: 4
Max nTPM: 985.7
Min nTPM: 139.7
RHH5210_R3581
186.1
RHH5302_R3668
139.7
RHH5238_R3610
549.1
RHH5267_R3639
985.7
Memory CD4 T-cell Th1/Th17 nTPM: 471.4
Samples: 4
Max nTPM: 1164.8
Min nTPM: 142.9
RHH5303_R3669
173.7
RHH5211_R3582
404.2
RHH5239_R3611
142.9
RHH5268_R3640
1164.8
Memory CD4 T-cell Th17 nTPM: 496.9
Samples: 4
Max nTPM: 866.6
Min nTPM: 124.6
RHH5304_R3670
154.0
RHH5212_R3583
842.4
RHH5240_R3612
124.6
RHH5269_R3641
866.6
Memory CD4 T-cell Th2 nTPM: 460.7
Samples: 4
Max nTPM: 954.2
Min nTPM: 178.3
RHH5305_R3671
179.0
RHH5213_R3584
531.1
RHH5241_R3613
178.3
RHH5270_R3642
954.2
Naive CD4 T-cell nTPM: 294.1
Samples: 4
Max nTPM: 574.4
Min nTPM: 89.8
RHH5306_R3672
284.0
RHH5214_R3585
574.4
RHH5242_R3614
89.8
RHH5271_R3643
228.0
Naive CD8 T-cell nTPM: 330.8
Samples: 4
Max nTPM: 752.3
Min nTPM: 146.3
RHH5201_R3572
218.9
RHH5229_R3601
752.3
RHH5258_R3630
205.5
RHH5287_R3659
146.3
Non-Vd2 gdTCR nTPM: 345.1
Samples: 4
Max nTPM: 660.7
Min nTPM: 177.1
RHH5235_R3607
660.7
RHH5264_R3636
177.1
RHH5207_R3578
217.0
RHH5299_R3665
325.5
T-reg nTPM: 294.0
Samples: 4
Max nTPM: 390.6
Min nTPM: 173.6
RHH5301_R3667
173.6
RHH5237_R3609
324.8
RHH5266_R3638
390.6
RHH5209_R3580
287.0
Terminal effector memory CD4 T-cell nTPM: 240.9
Samples: 2
Max nTPM: 337.1
Min nTPM: 144.7
RHH5243_R3615
337.1
RHH5272_R3644
144.7
Terminal effector memory CD8 T-cell nTPM: 342.9
Samples: 4
Max nTPM: 947.3
Min nTPM: 109.9
RHH5232_R3604
121.7
RHH5204_R3575
192.7
RHH5261_R3633
947.3
RHH5296_R3662
109.9
Vd2 gdTCR nTPM: 353.0
Samples: 4
Max nTPM: 368.5
Min nTPM: 335.2
RHH5234_R3606
343.1
RHH5206_R3577
368.5
RHH5263_R3635
335.2
RHH5298_R3664
365.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
