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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
570.0
nTPM
FANTOM5:
1498.2
Scaled Tags Per Million
Pig:
1170.8
nTPM
Allen mouse:
17.8
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
570.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 346.8
2301
Female, age 85, both hemispheres
400.6
1984
Male, age 76, both hemispheres
364.7
2188
Female, age 91, both hemispheres
325.4
2090
Male, age 80, both hemispheres
296.5
Dorsal cochlear nucleus nTPM: 366.8
2802
Male, age 74, right hemisphere
434.0
2058
Male, age 76, both hemispheres
403.7
2187
Female, age 91, both hemispheres
370.6
2370
Male, age 61, both hemispheres
318.0
2378
Male, age 80, both hemispheres
307.9
Dorsal tegmental nucleus nTPM: 513.8
1936
Male, age 76, left hemisphere
601.1
2083
Male, age 80, both hemispheres
571.5
2326
Male, age 74, both hemispheres
445.8
2358
Male, age 61, both hemispheres
436.9
Dorsolateral tegmental area nTPM: 474.7
2654
Male, age 80, both hemispheres
559.4
2141
Male, age 76, both hemispheres
502.8
2360
Male, age 74, both hemispheres
472.9
2751
Female, age 85, both hemispheres
455.3
2337
Male, age 61, both hemispheres
383.3
Kolliker-Fuse nucleus nTPM: 563.1
2315
Male, age 76, right hemisphere
936.6
2163
Male, age 80, both hemispheres
487.7
2793
Female, age 91, left hemisphere
265.0
Lateral lemniscal nuclei nTPM: 314.1
2169
Male, age 76, both hemispheres
458.7
2036
Male, age 80, both hemispheres
335.9
2746
Female, age 85, left hemisphere
282.5
2453
Male, age 74, right hemisphere
274.7
2320
Female, age 91, left hemisphere
218.5
Lateral parabrachial nucleus nTPM: 446.8
2792
Male, age 76, both hemispheres
599.8
2139
Female, age 85, right hemisphere
527.0
2013
Male, age 80, both hemispheres
402.9
2790
Male, age 61, both hemispheres
257.5
Lateral vestibular nucleus nTPM: 497.9
2184
Male, age 76, both hemispheres
532.2
2311
Male, age 80, both hemispheres
463.5
Locus coeruleus nTPM: 471.1
2788
Male, age 74, unknown
728.1
2317
Female, age 72, unknown
496.6
2123
Female, age 91, both hemispheres
452.4
1980
Male, age 76, both hemispheres
448.3
2720
Male, age 74, both hemispheres
412.6
2014
Male, age 55, unknown
402.6
2162
Male, age 80, both hemispheres
357.3
Medial parabrachial nucleus nTPM: 456.5
2854
Male, age 80, both hemispheres
586.1
2786
Male, age 76, both hemispheres
541.6
2170
Female, age 91, both hemispheres
421.0
2156
Male, age 61, both hemispheres
393.7
2463
Female, age 85, right hemisphere
340.0
Medial periolivary nuclei nTPM: 361.4
2063
Male, age 76, both hemispheres
472.0
2791
Male, age 74, right hemisphere
451.1
2171
Female, age 85, both hemispheres
400.0
2458
Female, age 91, both hemispheres
243.9
2081
Male, age 80, both hemispheres
239.9
Motor facial nucleus nTPM: 374.6
2062
Male, age 76, both hemispheres
481.6
2795
Female, age 91, both hemispheres
466.4
2365
Male, age 74, right hemisphere
380.4
2697
Female, age 85, both hemispheres
332.9
2126
Male, age 61, both hemispheres
301.1
2327
Male, age 80, both hemispheres
285.1
Motor trigeminal nucleus nTPM: 330.6
2309
Male, age 76, both hemispheres
487.5
2335
Male, age 61, both hemispheres
386.0
2079
Male, age 80, both hemispheres
313.8
2560
Male, age 74, both hemispheres
239.7
2321
Female, age 91, both hemispheres
226.1
Nuclei of the trapezoid body nTPM: 400.4
2159
Male, age 61, both hemispheres
534.9
1983
Male, age 76, both hemispheres
478.0
2735
Female, age 85, both hemispheres
354.7
2166
Male, age 80, both hemispheres
321.4
2368
Female, age 91, both hemispheres
313.0
Nucleus raphe magnus nTPM: 388.6
2455
Male, age 74, both hemispheres
477.2
2160
Male, age 61, both hemispheres
472.4
2051
Male, age 76, both hemispheres
411.5
2328
Male, age 80, both hemispheres
382.1
2172
Female, age 85, both hemispheres
325.9
2459
Female, age 91, both hemispheres
262.6
Paramedian reticular nucleus nTPM: 425.9
2052
Male, age 76, both hemispheres
562.9
2050
Female, age 85, both hemispheres
438.0
2057
Male, age 80, both hemispheres
393.8
2313
Male, age 61, both hemispheres
308.9
Pedunculopontine tegmental nucleus nTPM: 570.0
2338
Male, age 61, both hemispheres
646.2
2334
Male, age 80, both hemispheres
595.0
1921
Female, age 85, both hemispheres
468.6
Pontine nuclei nTPM: 367.4
1863
Male, age 55, unknown
705.5
2109
Female, age 72, unknown
426.0
2727
Male, age 61, right hemisphere
386.9
1968
Male, age 76, left hemisphere
354.1
2787
Female, age 85, both hemispheres
311.2
2319
Female, age 91, both hemispheres
265.1
2454
Male, age 74, left hemisphere
246.3
2115
Male, age 80, left hemisphere
244.1
Pontine raphe nucleus nTPM: 482.1
2853
Male, age 76, midline
564.9
2122
Female, age 85, midline
399.2
Posteroventral cochlear nucleus nTPM: 396.8
2070
Male, age 76, both hemispheres
539.0
2752
Female, age 85, both hemispheres
420.0
2341
Male, age 80, both hemispheres
401.4
2371
Male, age 61, both hemispheres
365.0
2135
Female, age 91, both hemispheres
258.8
Principal sensory trigeminal nucleus nTPM: 404.6
2324
Male, age 76, both hemispheres
625.5
2158
Male, age 61, both hemispheres
434.6
2008
Male, age 80, left hemisphere
343.3
2367
Female, age 91, left hemisphere
215.3
Reticular pontine nucleus, caudal nTPM: 329.3
2092
Male, age 76, both hemispheres
479.6
2332
Male, age 80, right hemisphere
320.1
2559
Male, age 74, both hemispheres
263.8
2457
Female, age 91, both hemispheres
253.6
Reticular pontine nucleus, oral nTPM: 409.4
1939
Male, age 80, both hemispheres
601.5
2167
Male, age 76, both hemispheres
515.8
2012
Female, age 85, both hemispheres
412.2
2366
Female, age 91, both hemispheres
308.0
2361
Male, age 74, both hemispheres
209.6
Reticulotegmental nucleus nTPM: 420.9
2325
Male, age 76, both hemispheres
493.8
2333
Male, age 80, both hemispheres
478.7
2322
Female, age 91, both hemispheres
392.1
2452
Male, age 74, both hemispheres
319.1
Spinal trigeminal nucleus, oral nTPM: 396.8
1978
Male, age 76, both hemispheres
438.2
2737
Female, age 85, both hemispheres
387.7
2164
Male, age 80, both hemispheres
364.4
Subcoeruleus area nTPM: 453.4
1958
Male, age 80, both hemispheres
567.6
2323
Female, age 91, left hemisphere
497.3
2369
Female, age 85, left hemisphere
461.2
2451
Male, age 74, both hemispheres
396.1
2089
Male, age 76, left hemisphere
344.9
Superior olive nTPM: 349.7
2364
Male, age 74, right hemisphere
412.0
2020
Male, age 76, both hemispheres
387.8
1875
Female, age 85, both hemispheres
349.2
2329
Male, age 80, right hemisphere
334.8
2561
Female, age 91, both hemispheres
264.7
Ventral periolivary nuclei nTPM: 387.4
2165
Male, age 80, both hemispheres
444.8
2130
Female, age 85, both hemispheres
429.2
2023
Male, age 76, both hemispheres
424.6
2794
Female, age 91, left hemisphere
250.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 381.1
2840
Female, age 85, both hemispheres
500.3
2359
Male, age 61, both hemispheres
462.9
1959
Male, age 76, both hemispheres
426.1
2161
Male, age 80, both hemispheres
340.6
2449
Male, age 74, both hemispheres
324.2
2456
Female, age 91, both hemispheres
232.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
1170.8
Pig sample
Sample description
nTPM
Pons nTPM: 1170.8
Samples: 4
Max nTPM: 1211.2
Min nTPM: 1114.3
Sample A
Female
1208.3
Sample B
Female
1149.4
Sample C
Male
1114.3
Sample D
Male
1211.2
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
