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MBNL1
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  • MBNL1
PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

MBNL1
Synonyms EXP, EXP35, EXP40, EXP42, KIAA0428, MBNL
Gene descriptioni

Full gene name according to HGNC.

Muscleblind like splicing regulator 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 3
Cytoband
Chromosome location (bp) 152243828 - 152465780
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

19
Ensembl ENSG00000152601 (version 109)
Entrez gene 4154
HGNC HGNC:6923
UniProt Q9NR56 (UniProt - Evidence at protein level)
neXtProt NX_Q9NR56
GeneCards MBNL1
Antibodypedia MBNL1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Mediates pre-mRNA alternative splicing regulation. Acts either as activator or repressor of splicing on specific pre-mRNA targets. Inhibits cardiac troponin-T (TNNT2) pre-mRNA exon inclusion but induces insulin receptor (IR) pre-mRNA exon inclusion in muscle. Antagonizes the alternative splicing activity pattern of CELF proteins. Regulates the TNNT2 exon 5 skipping through competition with U2AF2. Inhibits the formation of the spliceosome A complex on intron 4 of TNNT2 pre-mRNA. Binds to the stem-loop structure within the polypyrimidine tract of TNNT2 intron 4 during spliceosome assembly. Binds to the 5'-YGCU(U/G)Y-3'consensus sequence. Binds to the IR RNA. Binds to expanded CUG repeat RNA, which folds into a hairpin structure containing GC base pairs and bulged, unpaired U residues.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

RNA-binding
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

mRNA processing, mRNA splicing
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Metal-binding, Zinc
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a member of the muscleblind protein family which was initially described in Drosophila melanogaster. The encoded protein is a C3H-type zinc finger protein that modulates alternative splicing of pre-mRNAs. Muscleblind proteins bind specifically to expanded dsCUG RNA but not to normal size CUG repeats and may thereby play a role in the pathophysiology of myotonic dystrophy. Mice lacking this gene exhibited muscle abnormalities and cataracts. Several alternatively spliced transcript variants have been described but the full-length natures of only some have been determined. The different isoforms are thought to have different binding specificities and/or splicing activities. [provided by RefSeq, Sep 2015]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
MBNL1-201
ENSP00000282486
ENST00000282486
Q9NR56
[Direct mapping] Muscleblind-like protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000381 [regulation of alternative mRNA splicing, via spliceosome]
GO:0001701 [in utero embryonic development]
GO:0003723 [RNA binding]
GO:0003725 [double-stranded RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006397 [mRNA processing]
GO:0007399 [nervous system development]
GO:0008380 [RNA splicing]
GO:0010494 [cytoplasmic stress granule]
GO:0030326 [embryonic limb morphogenesis]
GO:0043484 [regulation of RNA splicing]
GO:0045445 [myoblast differentiation]
GO:0046872 [metal ion binding]
Show all
388 aa
41.8 kDa
No 0
MBNL1-202
ENSP00000282488
ENST00000282488
A0A0A0MQX8
[Direct mapping] Muscleblind-like protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0046872 [metal ion binding]
Show all
400 aa
43 kDa
No 0
MBNL1-203
ENSP00000319374
ENST00000324196
Q9NR56
[Direct mapping] Muscleblind-like protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000381 [regulation of alternative mRNA splicing, via spliceosome]
GO:0001701 [in utero embryonic development]
GO:0003723 [RNA binding]
GO:0003725 [double-stranded RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006397 [mRNA processing]
GO:0007399 [nervous system development]
GO:0008380 [RNA splicing]
GO:0010494 [cytoplasmic stress granule]
GO:0030326 [embryonic limb morphogenesis]
GO:0043484 [regulation of RNA splicing]
GO:0045445 [myoblast differentiation]
GO:0046872 [metal ion binding]
Show all
340 aa
37 kDa
No 0
MBNL1-204
ENSP00000319429
ENST00000324210
Q9NR56
[Direct mapping] Muscleblind-like protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000381 [regulation of alternative mRNA splicing, via spliceosome]
GO:0001069 [regulatory region RNA binding]
GO:0001701 [in utero embryonic development]
GO:0003723 [RNA binding]
GO:0003725 [double-stranded RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006397 [mRNA processing]
GO:0007399 [nervous system development]
GO:0008380 [RNA splicing]
GO:0010494 [cytoplasmic stress granule]
GO:0030326 [embryonic limb morphogenesis]
GO:0043484 [regulation of RNA splicing]
GO:0045445 [myoblast differentiation]
GO:0046872 [metal ion binding]
Show all
382 aa
41 kDa
No 0
MBNL1-205
ENSP00000347637
ENST00000355460
Q9NR56
[Direct mapping] Muscleblind-like protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000381 [regulation of alternative mRNA splicing, via spliceosome]
GO:0001701 [in utero embryonic development]
GO:0003723 [RNA binding]
GO:0003725 [double-stranded RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006397 [mRNA processing]
GO:0007399 [nervous system development]
GO:0008380 [RNA splicing]
GO:0010494 [cytoplasmic stress granule]
GO:0030326 [embryonic limb morphogenesis]
GO:0043484 [regulation of RNA splicing]
GO:0045445 [myoblast differentiation]
GO:0046872 [metal ion binding]
Show all
370 aa
39.8 kDa
No 0
MBNL1-206
ENSP00000350064
ENST00000357472
Q9NR56
[Direct mapping] Muscleblind-like protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000381 [regulation of alternative mRNA splicing, via spliceosome]
GO:0001701 [in utero embryonic development]
GO:0003723 [RNA binding]
GO:0003725 [double-stranded RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006397 [mRNA processing]
GO:0007399 [nervous system development]
GO:0008380 [RNA splicing]
GO:0010494 [cytoplasmic stress granule]
GO:0030326 [embryonic limb morphogenesis]
GO:0043484 [regulation of RNA splicing]
GO:0045445 [myoblast differentiation]
GO:0046872 [metal ion binding]
Show all
342 aa
37.1 kDa
No 0
MBNL1-207
ENSP00000417169
ENST00000459747
C9J4T8
[Direct mapping] Muscleblind-like protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0046872 [metal ion binding]
Show all
58 aa
6.6 kDa
No 0
MBNL1-209
ENSP00000420680
ENST00000460591
C9JCX1
[Direct mapping] Muscleblind-like protein 1
Show all
   Secreted proteins predicted by MDSEC
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0046872 [metal ion binding]
Show all
155 aa
16.6 kDa
Yes 0
MBNL1-211
ENSP00000418108
ENST00000463374
Q9NR56
[Direct mapping] Muscleblind-like protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000381 [regulation of alternative mRNA splicing, via spliceosome]
GO:0001701 [in utero embryonic development]
GO:0003723 [RNA binding]
GO:0003725 [double-stranded RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006397 [mRNA processing]
GO:0007399 [nervous system development]
GO:0008380 [RNA splicing]
GO:0010494 [cytoplasmic stress granule]
GO:0030326 [embryonic limb morphogenesis]
GO:0043484 [regulation of RNA splicing]
GO:0045445 [myoblast differentiation]
GO:0046872 [metal ion binding]
Show all
388 aa
41.8 kDa
No 0
MBNL1-212
ENSP00000418109
ENST00000464596
H7C4T5
[Direct mapping] Muscleblind-like protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0046872 [metal ion binding]
Show all
329 aa
35.7 kDa
No 0
MBNL1-213
ENSP00000417630
ENST00000465907
Q9NR56
[Direct mapping] Muscleblind-like protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000381 [regulation of alternative mRNA splicing, via spliceosome]
GO:0001701 [in utero embryonic development]
GO:0003723 [RNA binding]
GO:0003725 [double-stranded RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006397 [mRNA processing]
GO:0007399 [nervous system development]
GO:0008380 [RNA splicing]
GO:0010494 [cytoplasmic stress granule]
GO:0030326 [embryonic limb morphogenesis]
GO:0043484 [regulation of RNA splicing]
GO:0045445 [myoblast differentiation]
GO:0046872 [metal ion binding]
Show all
314 aa
34.2 kDa
No 0
MBNL1-216
ENSP00000418508
ENST00000478535
H7C4Y1
[Direct mapping] Muscleblind-like protein 1
Show all
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0046872 [metal ion binding]
Show all
210 aa
22.3 kDa
No 0
MBNL1-217
ENSP00000418876
ENST00000485509
Q9NR56
[Direct mapping] Muscleblind-like protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000381 [regulation of alternative mRNA splicing, via spliceosome]
GO:0001701 [in utero embryonic development]
GO:0003723 [RNA binding]
GO:0003725 [double-stranded RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006397 [mRNA processing]
GO:0007399 [nervous system development]
GO:0008380 [RNA splicing]
GO:0010494 [cytoplasmic stress granule]
GO:0030326 [embryonic limb morphogenesis]
GO:0043484 [regulation of RNA splicing]
GO:0045445 [myoblast differentiation]
GO:0046872 [metal ion binding]
Show all
340 aa
37 kDa
No 0
MBNL1-218
ENSP00000418427
ENST00000485910
Q9NR56
[Direct mapping] Muscleblind-like protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000381 [regulation of alternative mRNA splicing, via spliceosome]
GO:0001701 [in utero embryonic development]
GO:0003723 [RNA binding]
GO:0003725 [double-stranded RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006397 [mRNA processing]
GO:0007399 [nervous system development]
GO:0008380 [RNA splicing]
GO:0010494 [cytoplasmic stress granule]
GO:0030326 [embryonic limb morphogenesis]
GO:0043484 [regulation of RNA splicing]
GO:0045445 [myoblast differentiation]
GO:0046872 [metal ion binding]
Show all
302 aa
33 kDa
No 0
MBNL1-219
ENSP00000420103
ENST00000492948
Q9NR56
[Direct mapping] Muscleblind-like protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000381 [regulation of alternative mRNA splicing, via spliceosome]
GO:0001701 [in utero embryonic development]
GO:0003723 [RNA binding]
GO:0003725 [double-stranded RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006397 [mRNA processing]
GO:0007399 [nervous system development]
GO:0008380 [RNA splicing]
GO:0010494 [cytoplasmic stress granule]
GO:0030326 [embryonic limb morphogenesis]
GO:0043484 [regulation of RNA splicing]
GO:0045445 [myoblast differentiation]
GO:0046872 [metal ion binding]
Show all
342 aa
37.1 kDa
No 0
MBNL1-220
ENSP00000419347
ENST00000493459
Q86VM6
[Direct mapping] MBNL1 protein; Muscleblind-like (Drosophila), isoform CRA_f; Muscleblind-like protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0046872 [metal ion binding]
Show all
343 aa
36.6 kDa
No 0
MBNL1-221
ENSP00000417741
ENST00000495875
C9J7P7
[Direct mapping] Muscleblind-like protein 1
Show all
   Secreted proteins predicted by MDSEC
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
Show all
90 aa
9.1 kDa
Yes 0
MBNL1-223
ENSP00000420327
ENST00000498502
C9JP00
[Direct mapping] Muscleblind-like protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0046872 [metal ion binding]
Show all
348 aa
37.9 kDa
No 0
MBNL1-224
ENSP00000437491
ENST00000545754
Q9NR56
[Direct mapping] Muscleblind-like protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000381 [regulation of alternative mRNA splicing, via spliceosome]
GO:0001701 [in utero embryonic development]
GO:0003723 [RNA binding]
GO:0003725 [double-stranded RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006397 [mRNA processing]
GO:0007399 [nervous system development]
GO:0008380 [RNA splicing]
GO:0010494 [cytoplasmic stress granule]
GO:0030326 [embryonic limb morphogenesis]
GO:0043484 [regulation of RNA splicing]
GO:0045445 [myoblast differentiation]
GO:0046872 [metal ion binding]
Show all
314 aa
34.2 kDa
No 0

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