HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:13.6 nTPM
HPA Brain:24.3 nTPM
GTEx:13.6 nTPM
FANTOM5:29.1 Scaled Tags Per Million
Pig:17.1 nTPM
Mouse:6.4 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.3
Sample id Sample description nTPM
Hippocampus
nTPM: 18.2
1911 Female, age 85, right hemisphere 23.4
2529 Female, age 94, left hemisphere 19.4
2621 Female, age 67, right hemisphere 17.9
1855 Male, age 76, left hemisphere 17.1
1898 Male, age 80, left hemisphere 16.6
2148 Female, age 91, left hemisphere 14.9
Dentate gyrus
nTPM: 20.8
2530 Female, age 94, left hemisphere 34.7
2010 Male, age 76, both hemispheres 26.2
2528 Male, age 74, both hemispheres 18.4
2246 Female, age 85, both hemispheres 16.5
2531 Female, age 67, both hemispheres 14.8
1927 Female, age 91, both hemispheres 14.0
Entorhinal gyrus
nTPM: 17.6
2117 Female, age 91, right hemisphere 26.5
2764 Male, age 80, right hemisphere 19.6
2686 Male, age 75, right hemisphere 17.0
2613 Female, age 94, left hemisphere 14.8
1938 Female, age 85, left hemisphere 14.5
1787 Male, age 76, left hemisphere 13.5
Hippocampus, CA1
nTPM: 15.3
1873 Female, age 85, both hemispheres 19.4
2527 Male, age 74, both hemispheres 16.7
2082 Female, age 91, right hemisphere 15.6
2749 Male, age 80, left hemisphere 13.0
2045 Male, age 76, both hemispheres 11.7
Hippocampus, CA2
nTPM: 20.0
1963 Male, age 80, left hemisphere 25.6
2437 Female, age 94, left hemisphere 21.9
2249 Male, age 74, both hemispheres 20.8
1940 Female, age 85, left hemisphere 17.9
2113 Female, age 91, right hemisphere 17.2
1892 Male, age 76, both hemispheres 16.7
Hippocampus, CA3
nTPM: 15.2
1891 Female, age 85, both hemispheres 24.9
1867 Male, age 76, both hemispheres 19.1
2436 Male, age 74, both hemispheres 15.7
2137 Male, age 80, left hemisphere 11.0
2861 Female, age 67, both hemispheres 10.9
2620 Female, age 94, left hemisphere 9.4
Parahippocampal cortex
nTPM: 15.0
2532 Female, age 72, left hemisphere 21.8
2018 Male, age 76, both hemispheres 20.6
2692 Male, age 74, both hemispheres 18.8
1990 Female, age 91, right hemisphere 16.6
1850 Male, age 80, both hemispheres 16.1
2245 Female, age 91, both hemispheres 14.1
1933 Female, age 85, both hemispheres 13.7
2693 Female, age 94, both hemispheres 12.1
2622 Female, age 67, right hemisphere 9.4
2250 Female, age 67, right hemisphere 6.7
Perirhinal gyrus
nTPM: 10.5
2848 Male, age 76, right hemisphere 12.1
1794 Male, age 80, right hemisphere 11.5
2521 Female, age 94, right hemisphere 10.7
1847 Female, age 91, left hemisphere 9.7
1841 Female, age 85, right hemisphere 8.4
Subiculum
nTPM: 24.3
2042 Male, age 76, both hemispheres 37.1
1901 Male, age 80, both hemispheres 26.7
2438 Female, age 94, left hemisphere 25.9
1977 Female, age 85, both hemispheres 19.5
2619 Male, age 74, both hemispheres 18.8
2729 Female, age 91, right hemisphere 17.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.6
Samples: 197

Max nTPM: 44.4
Min nTPM: 1.2
Std nTPM: 7.5
Median nTPM: 12.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 44.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 41.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 34.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 29.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 29.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 29.1
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 28.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 28.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 27.9
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 27.1
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 27.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.1
FF:10153-102I9 76 years, female 32.2
FF:10169-103B7 60 years, female 25.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.1
Pig sample Sample description nTPM
Subiculum
nTPM: 9.0
Samples: 4

Max nTPM: 9.8
Min nTPM: 7.3
Sample A Female 7.3
Sample B Female 9.3
Sample C Male 9.8
Sample D Male 9.6
Dorsal hippocampus
nTPM: 17.1
Samples: 4

Max nTPM: 20.7
Min nTPM: 14.5
Sample A Female 15.4
Sample B Female 14.5
Sample C Male 17.9
Sample D Male 20.7
Entorhinal cortex
nTPM: 8.5
Samples: 4

Max nTPM: 9.9
Min nTPM: 7.7
Sample A Female 7.8
Sample B Female 7.7
Sample C Male 8.4
Sample D Male 9.9
Ventral hippocampus
nTPM: 11.8
Samples: 4

Max nTPM: 15.8
Min nTPM: 8.6
Sample A Female 10.9
Sample B Female 11.7
Sample C Male 8.6
Sample D Male 15.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.0
Samples: 4

Max nTPM: 7.5
Min nTPM: 5.1
Sample A Male 7.5
Sample B Male 5.9
Sample C Female 5.5
Sample D Female 5.1
Hippocampal formation
nTPM: 6.4
Samples: 4

Max nTPM: 6.5
Min nTPM: 6.1
Sample A Male 6.5
Sample B Male 6.5
Sample C Female 6.1
Sample D Female 6.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
77620467 Antisense, RP_070129_03_D11, Mouse strain C57BL/6J (56 days, male) 0.2

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