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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
36.1
nTPM
Monaco:
354.9
nTPM
Schmiedel:
119.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
36.1
HPA sample
nTPM
gdT-cell nTPM: 36.1
Samples: 6
Max nTPM: 48.3
Min nTPM: 17.3
P10809_1007
36.6
P10809_1022
32.0
P10809_1041
47.7
P10809_1060
48.3
P10809_1077
34.7
P10809_1098
17.3
MAIT T-cell nTPM: 25.4
Samples: 6
Max nTPM: 42.5
Min nTPM: 13.4
P10809_1006
18.3
P10809_1024
24.6
P10809_1043
18.6
P10809_1062
42.5
P10809_1083
34.8
P10809_1097
13.4
Memory CD4 T-cell nTPM: 23.5
Samples: 6
Max nTPM: 31.4
Min nTPM: 16.2
P10809_1014
16.8
P10809_1026
21.8
P10809_1045
25.2
P10809_1064
31.4
P10809_1086
29.5
P10809_1113
16.2
Memory CD8 T-cell nTPM: 30.8
Samples: 5
Max nTPM: 46.9
Min nTPM: 16.6
P10809_1012
20.2
P10809_1027
46.9
P10809_1046
31.4
P10809_1065
38.8
P10809_1111
16.6
Naive CD4 T-cell nTPM: 21.5
Samples: 6
Max nTPM: 29.6
Min nTPM: 13.3
P10809_1015
18.7
P10809_1030
19.6
P10809_1049
27.6
P10809_1068
29.6
P10809_1085
20.2
P10809_1112
13.3
Naive CD8 T-cell nTPM: 21.4
Samples: 6
Max nTPM: 31.6
Min nTPM: 10.8
P10809_1016
13.5
P10809_1031
15.6
P10809_1050
28.2
P10809_1069
31.6
P10809_1087
28.7
P10809_1110
10.8
T-reg nTPM: 19.4
Samples: 6
Max nTPM: 43.4
Min nTPM: 9.1
P10809_1018
13.8
P10809_1037
17.3
P10809_1056
9.3
P10809_1075
43.4
P10809_1094
23.7
P10809_1106
9.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
354.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 286.2
Samples: 4
Max nTPM: 325.9
Min nTPM: 234.7
RHH5202_R3573
276.6
RHH5230_R3602
234.7
RHH5259_R3631
307.6
RHH5288_R3660
325.9
Effector memory CD8 T-cell nTPM: 231.4
Samples: 4
Max nTPM: 315.4
Min nTPM: 143.6
RHH5203_R3574
315.4
RHH5231_R3603
161.4
RHH5260_R3632
143.6
RHH5289_R3661
305.3
MAIT T-cell nTPM: 235.8
Samples: 4
Max nTPM: 306.8
Min nTPM: 199.7
RHH5233_R3605
222.8
RHH5205_R3576
306.8
RHH5262_R3634
199.7
RHH5297_R3663
214.0
Memory CD4 T-cell TFH nTPM: 253.2
Samples: 4
Max nTPM: 312.8
Min nTPM: 178.6
RHH5300_R3666
245.9
RHH5236_R3608
178.6
RHH5265_R3637
312.8
RHH5208_R3579
275.4
Memory CD4 T-cell Th1 nTPM: 232.0
Samples: 4
Max nTPM: 254.6
Min nTPM: 205.2
RHH5210_R3581
249.1
RHH5302_R3668
205.2
RHH5238_R3610
254.6
RHH5267_R3639
219.0
Memory CD4 T-cell Th1/Th17 nTPM: 219.5
Samples: 4
Max nTPM: 282.6
Min nTPM: 138.5
RHH5303_R3669
223.8
RHH5211_R3582
138.5
RHH5239_R3611
233.0
RHH5268_R3640
282.6
Memory CD4 T-cell Th17 nTPM: 167.3
Samples: 4
Max nTPM: 226.0
Min nTPM: 102.3
RHH5304_R3670
226.0
RHH5212_R3583
139.7
RHH5240_R3612
102.3
RHH5269_R3641
201.2
Memory CD4 T-cell Th2 nTPM: 193.4
Samples: 4
Max nTPM: 298.3
Min nTPM: 121.9
RHH5305_R3671
162.8
RHH5213_R3584
121.9
RHH5241_R3613
298.3
RHH5270_R3642
190.4
Naive CD4 T-cell nTPM: 171.1
Samples: 4
Max nTPM: 204.5
Min nTPM: 138.7
RHH5306_R3672
144.9
RHH5214_R3585
138.7
RHH5242_R3614
204.5
RHH5271_R3643
196.1
Naive CD8 T-cell nTPM: 155.2
Samples: 4
Max nTPM: 180.0
Min nTPM: 110.0
RHH5201_R3572
180.0
RHH5229_R3601
110.0
RHH5258_R3630
159.0
RHH5287_R3659
171.7
Non-Vd2 gdTCR nTPM: 245.9
Samples: 4
Max nTPM: 317.1
Min nTPM: 155.7
RHH5235_R3607
248.4
RHH5264_R3636
155.7
RHH5207_R3578
317.1
RHH5299_R3665
262.3
T-reg nTPM: 151.3
Samples: 4
Max nTPM: 198.5
Min nTPM: 82.4
RHH5301_R3667
147.3
RHH5237_R3609
82.4
RHH5266_R3638
176.9
RHH5209_R3580
198.5
Terminal effector memory CD4 T-cell nTPM: 354.9
Samples: 2
Max nTPM: 361.3
Min nTPM: 348.4
RHH5243_R3615
361.3
RHH5272_R3644
348.4
Terminal effector memory CD8 T-cell nTPM: 260.1
Samples: 4
Max nTPM: 382.2
Min nTPM: 119.4
RHH5232_R3604
256.8
RHH5204_R3575
382.2
RHH5261_R3633
119.4
RHH5296_R3662
282.1
Vd2 gdTCR nTPM: 206.6
Samples: 4
Max nTPM: 279.8
Min nTPM: 135.1
RHH5234_R3606
256.3
RHH5206_R3577
155.1
RHH5263_R3635
135.1
RHH5298_R3664
279.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
