HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:11.0 nTPM
HPA Brain:61.6 nTPM
GTEx:11.0 nTPM
FANTOM5:177.4 Scaled Tags Per Million
Pig:138.7 nTPM
Mouse:136.1 nTPM
Allen mouse:13.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003160Antibody HPA048156
Glial cells MediumNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 61.6
Sample id Sample description nTPM
Hippocampus
nTPM: 39.1
1898 Male, age 80, left hemisphere 60.4
1855 Male, age 76, left hemisphere 47.0
2621 Female, age 67, right hemisphere 40.3
2148 Female, age 91, left hemisphere 38.8
1911 Female, age 85, right hemisphere 29.5
2529 Female, age 94, left hemisphere 18.6
Dentate gyrus
nTPM: 50.8
1927 Female, age 91, both hemispheres 127.0
2010 Male, age 76, both hemispheres 47.6
2246 Female, age 85, both hemispheres 43.5
2528 Male, age 74, both hemispheres 33.2
2531 Female, age 67, both hemispheres 27.7
2530 Female, age 94, left hemisphere 25.7
Entorhinal gyrus
nTPM: 30.0
2764 Male, age 80, right hemisphere 44.0
2613 Female, age 94, left hemisphere 35.2
1938 Female, age 85, left hemisphere 31.7
1787 Male, age 76, left hemisphere 29.5
2686 Male, age 75, right hemisphere 23.9
2117 Female, age 91, right hemisphere 16.0
Hippocampus, CA1
nTPM: 49.2
2749 Male, age 80, left hemisphere 78.5
1873 Female, age 85, both hemispheres 67.3
2045 Male, age 76, both hemispheres 37.1
2527 Male, age 74, both hemispheres 34.1
2082 Female, age 91, right hemisphere 29.2
Hippocampus, CA2
nTPM: 46.2
1892 Male, age 76, both hemispheres 86.6
1963 Male, age 80, left hemisphere 76.8
2437 Female, age 94, left hemisphere 32.9
2113 Female, age 91, right hemisphere 28.3
1940 Female, age 85, left hemisphere 27.2
2249 Male, age 74, both hemispheres 25.3
Hippocampus, CA3
nTPM: 37.6
2137 Male, age 80, left hemisphere 60.9
2436 Male, age 74, both hemispheres 38.7
1867 Male, age 76, both hemispheres 36.1
1891 Female, age 85, both hemispheres 33.3
2620 Female, age 94, left hemisphere 30.7
2861 Female, age 67, both hemispheres 25.6
Parahippocampal cortex
nTPM: 44.2
2245 Female, age 91, both hemispheres 62.0
1850 Male, age 80, both hemispheres 61.1
2250 Female, age 67, right hemisphere 60.9
2693 Female, age 94, both hemispheres 59.9
1990 Female, age 91, right hemisphere 47.3
1933 Female, age 85, both hemispheres 43.8
2532 Female, age 72, left hemisphere 37.3
2622 Female, age 67, right hemisphere 25.5
2018 Male, age 76, both hemispheres 25.3
2692 Male, age 74, both hemispheres 19.2
Perirhinal gyrus
nTPM: 61.6
1847 Female, age 91, left hemisphere 83.7
2521 Female, age 94, right hemisphere 66.5
1794 Male, age 80, right hemisphere 61.4
1841 Female, age 85, right hemisphere 52.5
2848 Male, age 76, right hemisphere 43.8
Subiculum
nTPM: 28.8
1901 Male, age 80, both hemispheres 38.2
2438 Female, age 94, left hemisphere 34.7
1977 Female, age 85, both hemispheres 33.9
2619 Male, age 74, both hemispheres 25.3
2729 Female, age 91, right hemisphere 22.5
2042 Male, age 76, both hemispheres 18.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.0
Samples: 197

Max nTPM: 43.1
Min nTPM: 0.2
Std nTPM: 8.5
Median nTPM: 9.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 43.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 42.4
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 38.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 35.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 33.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 32.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 31.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 29.2
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 28.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 27.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 27.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 177.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 177.4
FF:10169-103B7 60 years, female 260.6
FF:10153-102I9 76 years, female 94.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 138.7
Pig sample Sample description nTPM
Subiculum
nTPM: 117.9
Samples: 4

Max nTPM: 144.1
Min nTPM: 90.1
Sample A Female 125.1
Sample B Female 90.1
Sample C Male 144.1
Sample D Male 112.3
Dorsal hippocampus
nTPM: 104.0
Samples: 4

Max nTPM: 113.7
Min nTPM: 89.6
Sample A Female 113.5
Sample B Female 113.7
Sample C Male 99.3
Sample D Male 89.6
Entorhinal cortex
nTPM: 111.9
Samples: 4

Max nTPM: 115.7
Min nTPM: 105.7
Sample A Female 115.4
Sample B Female 105.7
Sample C Male 115.7
Sample D Male 110.9
Ventral hippocampus
nTPM: 138.7
Samples: 4

Max nTPM: 175.1
Min nTPM: 97.3
Sample A Female 175.1
Sample B Female 111.7
Sample C Male 170.5
Sample D Male 97.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 136.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 136.1
Samples: 4

Max nTPM: 206.1
Min nTPM: 96.9
Sample A Male 96.9
Sample B Male 111.8
Sample C Female 129.7
Sample D Female 206.1
Hippocampal formation
nTPM: 106.6
Samples: 4

Max nTPM: 117.8
Min nTPM: 94.2
Sample A Male 117.8
Sample B Male 111.4
Sample C Female 102.8
Sample D Female 94.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.5
73521805 Antisense, RP_051101_03_A04, Mouse strain C57BL/6J (56 days, male) 15.7
69816745 Antisense, RP_050510_01_G08, Mouse strain C57BL/6J (56 days, male) 11.3

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