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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
36.5
nTPM
Monaco:
73.1
nTPM
Schmiedel:
70.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
36.5
HPA sample
nTPM
gdT-cell nTPM: 25.1
Samples: 6
Max nTPM: 38.0
Min nTPM: 12.3
P10809_1007
12.3
P10809_1022
38.0
P10809_1041
23.1
P10809_1060
30.1
P10809_1077
26.4
P10809_1098
20.8
MAIT T-cell nTPM: 11.0
Samples: 6
Max nTPM: 14.6
Min nTPM: 6.7
P10809_1006
6.7
P10809_1024
13.2
P10809_1043
12.5
P10809_1062
14.6
P10809_1083
11.9
P10809_1097
7.1
Memory CD4 T-cell nTPM: 10.9
Samples: 6
Max nTPM: 22.0
Min nTPM: 4.9
P10809_1014
4.9
P10809_1026
7.9
P10809_1045
9.0
P10809_1064
22.0
P10809_1086
14.5
P10809_1113
7.1
Memory CD8 T-cell nTPM: 22.3
Samples: 5
Max nTPM: 26.4
Min nTPM: 11.8
P10809_1012
11.8
P10809_1027
24.9
P10809_1046
23.0
P10809_1065
26.4
P10809_1111
25.6
Naive CD4 T-cell nTPM: 0.7
Samples: 6
Max nTPM: 3.3
Min nTPM: 0.0
P10809_1015
0.0
P10809_1030
0.0
P10809_1049
0.5
P10809_1068
0.3
P10809_1085
3.3
P10809_1112
0.0
Naive CD8 T-cell nTPM: 9.9
Samples: 6
Max nTPM: 20.2
Min nTPM: 0.1
P10809_1016
0.1
P10809_1031
4.2
P10809_1050
8.9
P10809_1069
20.2
P10809_1087
20.0
P10809_1110
6.1
T-reg nTPM: 36.5
Samples: 6
Max nTPM: 58.3
Min nTPM: 22.3
P10809_1018
32.9
P10809_1037
34.5
P10809_1056
22.3
P10809_1075
25.1
P10809_1094
58.3
P10809_1106
46.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
73.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 17.1
Samples: 4
Max nTPM: 26.1
Min nTPM: 10.9
RHH5202_R3573
10.9
RHH5230_R3602
26.1
RHH5259_R3631
14.5
RHH5288_R3660
16.9
Effector memory CD8 T-cell nTPM: 73.1
Samples: 4
Max nTPM: 91.9
Min nTPM: 52.3
RHH5203_R3574
91.9
RHH5231_R3603
69.3
RHH5260_R3632
79.0
RHH5289_R3661
52.3
MAIT T-cell nTPM: 30.2
Samples: 4
Max nTPM: 44.7
Min nTPM: 24.2
RHH5233_R3605
26.6
RHH5205_R3576
44.7
RHH5262_R3634
24.2
RHH5297_R3663
25.2
Memory CD4 T-cell TFH nTPM: 4.3
Samples: 4
Max nTPM: 6.8
Min nTPM: 2.3
RHH5300_R3666
3.7
RHH5236_R3608
2.3
RHH5265_R3637
6.8
RHH5208_R3579
4.2
Memory CD4 T-cell Th1 nTPM: 13.1
Samples: 4
Max nTPM: 15.5
Min nTPM: 9.9
RHH5210_R3581
9.9
RHH5302_R3668
12.4
RHH5238_R3610
15.5
RHH5267_R3639
14.4
Memory CD4 T-cell Th1/Th17 nTPM: 15.4
Samples: 4
Max nTPM: 26.0
Min nTPM: 8.9
RHH5303_R3669
8.9
RHH5211_R3582
26.0
RHH5239_R3611
11.3
RHH5268_R3640
15.3
Memory CD4 T-cell Th17 nTPM: 21.3
Samples: 4
Max nTPM: 30.3
Min nTPM: 14.2
RHH5304_R3670
14.2
RHH5212_R3583
30.3
RHH5240_R3612
20.7
RHH5269_R3641
20.0
Memory CD4 T-cell Th2 nTPM: 15.8
Samples: 4
Max nTPM: 25.8
Min nTPM: 7.9
RHH5305_R3671
10.1
RHH5213_R3584
25.8
RHH5241_R3613
7.9
RHH5270_R3642
19.2
Naive CD4 T-cell nTPM: 0.7
Samples: 4
Max nTPM: 2.1
Min nTPM: 0.0
RHH5306_R3672
0.0
RHH5214_R3585
0.7
RHH5242_R3614
2.1
RHH5271_R3643
0.0
Naive CD8 T-cell nTPM: 0.0
Samples: 4
Max nTPM: 0.0
Min nTPM: 0.0
RHH5201_R3572
0.0
RHH5229_R3601
0.0
RHH5258_R3630
0.0
RHH5287_R3659
0.0
Non-Vd2 gdTCR nTPM: 56.9
Samples: 4
Max nTPM: 75.2
Min nTPM: 41.6
RHH5235_R3607
75.2
RHH5264_R3636
54.5
RHH5207_R3578
56.2
RHH5299_R3665
41.6
T-reg nTPM: 28.6
Samples: 4
Max nTPM: 37.1
Min nTPM: 24.0
RHH5301_R3667
25.8
RHH5237_R3609
37.1
RHH5266_R3638
27.6
RHH5209_R3580
24.0
Terminal effector memory CD4 T-cell nTPM: 59.2
Samples: 2
Max nTPM: 90.9
Min nTPM: 27.4
RHH5243_R3615
90.9
RHH5272_R3644
27.4
Terminal effector memory CD8 T-cell nTPM: 60.4
Samples: 4
Max nTPM: 74.4
Min nTPM: 34.0
RHH5232_R3604
67.3
RHH5204_R3575
65.9
RHH5261_R3633
74.4
RHH5296_R3662
34.0
Vd2 gdTCR nTPM: 64.4
Samples: 4
Max nTPM: 81.0
Min nTPM: 44.5
RHH5234_R3606
75.1
RHH5206_R3577
56.8
RHH5263_R3635
81.0
RHH5298_R3664
44.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
