We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
16.7
nTPM
Monaco:
89.1
nTPM
Schmiedel:
147.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
16.7
HPA sample
nTPM
gdT-cell nTPM: 12.8
Samples: 6
Max nTPM: 14.9
Min nTPM: 8.7
P10809_1007
11.7
P10809_1022
14.1
P10809_1041
8.7
P10809_1060
14.9
P10809_1077
12.5
P10809_1098
14.6
MAIT T-cell nTPM: 15.3
Samples: 6
Max nTPM: 18.7
Min nTPM: 10.4
P10809_1006
16.3
P10809_1024
18.7
P10809_1043
10.4
P10809_1062
17.1
P10809_1083
13.7
P10809_1097
15.8
Memory CD4 T-cell nTPM: 13.2
Samples: 6
Max nTPM: 15.3
Min nTPM: 10.8
P10809_1014
13.3
P10809_1026
10.8
P10809_1045
11.0
P10809_1064
15.3
P10809_1086
14.1
P10809_1113
14.4
Memory CD8 T-cell nTPM: 14.2
Samples: 5
Max nTPM: 16.0
Min nTPM: 12.4
P10809_1012
13.6
P10809_1027
13.8
P10809_1046
12.4
P10809_1065
15.2
P10809_1111
16.0
Naive CD4 T-cell nTPM: 13.5
Samples: 6
Max nTPM: 18.2
Min nTPM: 10.1
P10809_1015
14.4
P10809_1030
10.1
P10809_1049
11.0
P10809_1068
14.9
P10809_1085
18.2
P10809_1112
12.2
Naive CD8 T-cell nTPM: 13.6
Samples: 6
Max nTPM: 17.4
Min nTPM: 11.1
P10809_1016
11.8
P10809_1031
15.5
P10809_1050
11.8
P10809_1069
14.1
P10809_1087
17.4
P10809_1110
11.1
T-reg nTPM: 16.7
Samples: 6
Max nTPM: 20.9
Min nTPM: 12.7
P10809_1018
14.8
P10809_1037
12.7
P10809_1056
13.3
P10809_1075
20.9
P10809_1094
20.1
P10809_1106
18.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
89.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 66.8
Samples: 4
Max nTPM: 89.6
Min nTPM: 53.0
RHH5202_R3573
65.3
RHH5230_R3602
53.0
RHH5259_R3631
89.6
RHH5288_R3660
59.4
Effector memory CD8 T-cell nTPM: 73.4
Samples: 4
Max nTPM: 82.2
Min nTPM: 64.0
RHH5203_R3574
73.5
RHH5231_R3603
74.0
RHH5260_R3632
82.2
RHH5289_R3661
64.0
MAIT T-cell nTPM: 64.5
Samples: 4
Max nTPM: 79.4
Min nTPM: 46.5
RHH5233_R3605
61.9
RHH5205_R3576
79.4
RHH5262_R3634
70.1
RHH5297_R3663
46.5
Memory CD4 T-cell TFH nTPM: 57.3
Samples: 4
Max nTPM: 67.3
Min nTPM: 46.0
RHH5300_R3666
46.0
RHH5236_R3608
58.6
RHH5265_R3637
57.1
RHH5208_R3579
67.3
Memory CD4 T-cell Th1 nTPM: 63.9
Samples: 4
Max nTPM: 84.5
Min nTPM: 48.0
RHH5210_R3581
58.6
RHH5302_R3668
48.0
RHH5238_R3610
84.5
RHH5267_R3639
64.3
Memory CD4 T-cell Th1/Th17 nTPM: 69.6
Samples: 4
Max nTPM: 97.1
Min nTPM: 56.8
RHH5303_R3669
62.9
RHH5211_R3582
56.8
RHH5239_R3611
97.1
RHH5268_R3640
61.6
Memory CD4 T-cell Th17 nTPM: 62.6
Samples: 4
Max nTPM: 71.8
Min nTPM: 57.1
RHH5304_R3670
60.1
RHH5212_R3583
57.1
RHH5240_R3612
71.8
RHH5269_R3641
61.3
Memory CD4 T-cell Th2 nTPM: 54.2
Samples: 4
Max nTPM: 58.4
Min nTPM: 45.6
RHH5305_R3671
45.6
RHH5213_R3584
54.7
RHH5241_R3613
58.4
RHH5270_R3642
58.0
Naive CD4 T-cell nTPM: 52.2
Samples: 4
Max nTPM: 57.3
Min nTPM: 47.7
RHH5306_R3672
47.7
RHH5214_R3585
48.3
RHH5242_R3614
55.6
RHH5271_R3643
57.3
Naive CD8 T-cell nTPM: 62.1
Samples: 4
Max nTPM: 66.4
Min nTPM: 57.7
RHH5201_R3572
63.0
RHH5229_R3601
66.4
RHH5258_R3630
57.7
RHH5287_R3659
61.1
Non-Vd2 gdTCR nTPM: 65.5
Samples: 4
Max nTPM: 78.8
Min nTPM: 52.2
RHH5235_R3607
78.8
RHH5264_R3636
69.4
RHH5207_R3578
61.4
RHH5299_R3665
52.2
T-reg nTPM: 56.8
Samples: 4
Max nTPM: 71.9
Min nTPM: 41.8
RHH5301_R3667
41.8
RHH5237_R3609
71.9
RHH5266_R3638
53.6
RHH5209_R3580
59.7
Terminal effector memory CD4 T-cell nTPM: 89.1
Samples: 2
Max nTPM: 93.9
Min nTPM: 84.2
RHH5243_R3615
93.9
RHH5272_R3644
84.2
Terminal effector memory CD8 T-cell nTPM: 60.3
Samples: 4
Max nTPM: 71.3
Min nTPM: 48.9
RHH5232_R3604
60.1
RHH5204_R3575
48.9
RHH5261_R3633
71.3
RHH5296_R3662
60.9
Vd2 gdTCR nTPM: 58.0
Samples: 4
Max nTPM: 74.4
Min nTPM: 44.0
RHH5234_R3606
74.4
RHH5206_R3577
44.0
RHH5263_R3635
65.6
RHH5298_R3664
47.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
