We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
22.2
nTPM
Monaco:
17.4
nTPM
Schmiedel:
213.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
22.2
HPA sample
nTPM
gdT-cell nTPM: 13.2
Samples: 6
Max nTPM: 24.1
Min nTPM: 3.9
P10809_1007
9.5
P10809_1022
3.9
P10809_1041
11.5
P10809_1060
14.3
P10809_1077
16.1
P10809_1098
24.1
MAIT T-cell nTPM: 11.1
Samples: 6
Max nTPM: 15.7
Min nTPM: 6.5
P10809_1006
10.4
P10809_1024
6.5
P10809_1043
8.6
P10809_1062
15.7
P10809_1083
11.4
P10809_1097
14.0
Memory CD4 T-cell nTPM: 19.4
Samples: 6
Max nTPM: 31.8
Min nTPM: 8.8
P10809_1014
16.1
P10809_1026
10.5
P10809_1045
8.8
P10809_1064
23.7
P10809_1086
25.6
P10809_1113
31.8
Memory CD8 T-cell nTPM: 14.8
Samples: 5
Max nTPM: 24.4
Min nTPM: 5.3
P10809_1012
9.8
P10809_1027
11.2
P10809_1046
5.3
P10809_1065
24.4
P10809_1111
23.5
Naive CD4 T-cell nTPM: 19.2
Samples: 6
Max nTPM: 29.0
Min nTPM: 7.2
P10809_1015
20.3
P10809_1030
13.8
P10809_1049
7.2
P10809_1068
20.7
P10809_1085
23.9
P10809_1112
29.0
Naive CD8 T-cell nTPM: 20.3
Samples: 6
Max nTPM: 30.3
Min nTPM: 12.5
P10809_1016
18.2
P10809_1031
12.5
P10809_1050
16.2
P10809_1069
20.6
P10809_1087
30.3
P10809_1110
24.0
T-reg nTPM: 22.2
Samples: 6
Max nTPM: 32.2
Min nTPM: 12.7
P10809_1018
22.3
P10809_1037
13.4
P10809_1056
12.7
P10809_1075
24.5
P10809_1094
28.0
P10809_1106
32.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
17.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 10.9
Samples: 4
Max nTPM: 13.2
Min nTPM: 6.8
RHH5202_R3573
6.8
RHH5230_R3602
12.0
RHH5259_R3631
13.2
RHH5288_R3660
11.5
Effector memory CD8 T-cell nTPM: 11.0
Samples: 4
Max nTPM: 13.9
Min nTPM: 8.2
RHH5203_R3574
13.9
RHH5231_R3603
8.2
RHH5260_R3632
10.7
RHH5289_R3661
11.0
MAIT T-cell nTPM: 7.6
Samples: 4
Max nTPM: 9.1
Min nTPM: 5.3
RHH5233_R3605
5.3
RHH5205_R3576
9.1
RHH5262_R3634
8.5
RHH5297_R3663
7.3
Memory CD4 T-cell TFH nTPM: 12.6
Samples: 4
Max nTPM: 17.9
Min nTPM: 9.2
RHH5300_R3666
9.2
RHH5236_R3608
17.9
RHH5265_R3637
13.5
RHH5208_R3579
9.7
Memory CD4 T-cell Th1 nTPM: 14.7
Samples: 4
Max nTPM: 17.5
Min nTPM: 11.5
RHH5210_R3581
11.5
RHH5302_R3668
17.5
RHH5238_R3610
16.6
RHH5267_R3639
13.2
Memory CD4 T-cell Th1/Th17 nTPM: 12.3
Samples: 4
Max nTPM: 14.7
Min nTPM: 9.6
RHH5303_R3669
14.7
RHH5211_R3582
11.4
RHH5239_R3611
9.6
RHH5268_R3640
13.5
Memory CD4 T-cell Th17 nTPM: 10.6
Samples: 4
Max nTPM: 11.8
Min nTPM: 9.3
RHH5304_R3670
10.0
RHH5212_R3583
11.8
RHH5240_R3612
11.2
RHH5269_R3641
9.3
Memory CD4 T-cell Th2 nTPM: 15.1
Samples: 4
Max nTPM: 21.2
Min nTPM: 12.0
RHH5305_R3671
14.6
RHH5213_R3584
12.5
RHH5241_R3613
12.0
RHH5270_R3642
21.2
Naive CD4 T-cell nTPM: 11.0
Samples: 4
Max nTPM: 12.4
Min nTPM: 9.2
RHH5306_R3672
12.4
RHH5214_R3585
11.8
RHH5242_R3614
10.5
RHH5271_R3643
9.2
Naive CD8 T-cell nTPM: 11.4
Samples: 4
Max nTPM: 14.5
Min nTPM: 8.8
RHH5201_R3572
8.8
RHH5229_R3601
14.5
RHH5258_R3630
10.3
RHH5287_R3659
12.1
Non-Vd2 gdTCR nTPM: 8.2
Samples: 4
Max nTPM: 9.4
Min nTPM: 6.7
RHH5235_R3607
6.7
RHH5264_R3636
8.0
RHH5207_R3578
9.4
RHH5299_R3665
8.6
T-reg nTPM: 13.8
Samples: 4
Max nTPM: 15.1
Min nTPM: 12.2
RHH5301_R3667
13.4
RHH5237_R3609
14.3
RHH5266_R3638
15.1
RHH5209_R3580
12.2
Terminal effector memory CD4 T-cell nTPM: 15.3
Samples: 2
Max nTPM: 21.6
Min nTPM: 8.9
RHH5243_R3615
8.9
RHH5272_R3644
21.6
Terminal effector memory CD8 T-cell nTPM: 10.0
Samples: 4
Max nTPM: 14.4
Min nTPM: 5.4
RHH5232_R3604
5.4
RHH5204_R3575
14.4
RHH5261_R3633
14.1
RHH5296_R3662
6.0
Vd2 gdTCR nTPM: 17.4
Samples: 4
Max nTPM: 26.8
Min nTPM: 13.7
RHH5234_R3606
13.7
RHH5206_R3577
26.8
RHH5263_R3635
15.3
RHH5298_R3664
13.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
