HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:11.7 nTPM
HPA Brain:56.8 nTPM
GTEx:11.7 nTPM
FANTOM5:17.0 Scaled Tags Per Million
Pig:39.6 nTPM
Mouse:53.4 nTPM
Allen mouse:4.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011136Antibody HPA048565Antibody CAB037292
Glial cells Not detectedNot detectedLow
Neuronal cells Not detectedMediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 56.8
Sample id Sample description nTPM
Hippocampus
nTPM: 41.9
2529 Female, age 94, left hemisphere 46.5
1911 Female, age 85, right hemisphere 45.2
2621 Female, age 67, right hemisphere 43.4
1898 Male, age 80, left hemisphere 40.5
1855 Male, age 76, left hemisphere 39.1
2148 Female, age 91, left hemisphere 36.6
Dentate gyrus
nTPM: 41.5
2530 Female, age 94, left hemisphere 50.8
2246 Female, age 85, both hemispheres 45.2
2528 Male, age 74, both hemispheres 41.4
2531 Female, age 67, both hemispheres 39.9
1927 Female, age 91, both hemispheres 39.3
2010 Male, age 76, both hemispheres 32.4
Entorhinal gyrus
nTPM: 55.2
2613 Female, age 94, left hemisphere 68.4
2686 Male, age 75, right hemisphere 59.0
2764 Male, age 80, right hemisphere 56.5
1787 Male, age 76, left hemisphere 55.6
1938 Female, age 85, left hemisphere 54.9
2117 Female, age 91, right hemisphere 36.9
Hippocampus, CA1
nTPM: 40.3
2749 Male, age 80, left hemisphere 52.4
2527 Male, age 74, both hemispheres 48.1
1873 Female, age 85, both hemispheres 38.0
2082 Female, age 91, right hemisphere 35.4
2045 Male, age 76, both hemispheres 27.5
Hippocampus, CA2
nTPM: 43.9
2437 Female, age 94, left hemisphere 52.5
1892 Male, age 76, both hemispheres 48.8
1963 Male, age 80, left hemisphere 41.4
1940 Female, age 85, left hemisphere 41.0
2249 Male, age 74, both hemispheres 41.0
2113 Female, age 91, right hemisphere 38.5
Hippocampus, CA3
nTPM: 45.5
2137 Male, age 80, left hemisphere 64.5
1867 Male, age 76, both hemispheres 51.2
2436 Male, age 74, both hemispheres 43.8
2861 Female, age 67, both hemispheres 40.6
1891 Female, age 85, both hemispheres 38.9
2620 Female, age 94, left hemisphere 34.0
Parahippocampal cortex
nTPM: 56.8
2532 Female, age 72, left hemisphere 75.1
2622 Female, age 67, right hemisphere 68.9
1850 Male, age 80, both hemispheres 59.4
2245 Female, age 91, both hemispheres 57.3
2693 Female, age 94, both hemispheres 55.6
1933 Female, age 85, both hemispheres 53.7
2250 Female, age 67, right hemisphere 53.7
1990 Female, age 91, right hemisphere 51.5
2692 Male, age 74, both hemispheres 47.3
2018 Male, age 76, both hemispheres 45.8
Perirhinal gyrus
nTPM: 52.1
1794 Male, age 80, right hemisphere 54.5
2521 Female, age 94, right hemisphere 53.3
2848 Male, age 76, right hemisphere 52.3
1841 Female, age 85, right hemisphere 50.9
1847 Female, age 91, left hemisphere 49.5
Subiculum
nTPM: 46.6
2438 Female, age 94, left hemisphere 59.0
1901 Male, age 80, both hemispheres 52.6
2619 Male, age 74, both hemispheres 50.8
1977 Female, age 85, both hemispheres 42.7
2042 Male, age 76, both hemispheres 41.4
2729 Female, age 91, right hemisphere 33.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.7
Samples: 197

Max nTPM: 25.2
Min nTPM: 6.7
Std nTPM: 3.1
Median nTPM: 11.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 25.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 23.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 22.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 19.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 19.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 19.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 19.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 18.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 18.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 18.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 18.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.0
FF:10153-102I9 76 years, female 17.4
FF:10169-103B7 60 years, female 16.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.6
Pig sample Sample description nTPM
Subiculum
nTPM: 21.5
Samples: 4

Max nTPM: 31.4
Min nTPM: 17.2
Sample A Female 31.4
Sample B Female 19.2
Sample C Male 17.2
Sample D Male 18.0
Dorsal hippocampus
nTPM: 18.8
Samples: 4

Max nTPM: 22.7
Min nTPM: 12.9
Sample A Female 20.5
Sample B Female 19.1
Sample C Male 22.7
Sample D Male 12.9
Entorhinal cortex
nTPM: 39.6
Samples: 4

Max nTPM: 42.4
Min nTPM: 36.6
Sample A Female 41.9
Sample B Female 37.6
Sample C Male 36.6
Sample D Male 42.4
Ventral hippocampus
nTPM: 17.5
Samples: 4

Max nTPM: 28.1
Min nTPM: 11.6
Sample A Female 11.6
Sample B Female 13.3
Sample C Male 16.8
Sample D Male 28.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 53.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 53.4
Samples: 4

Max nTPM: 57.9
Min nTPM: 42.3
Sample A Male 56.0
Sample B Male 57.9
Sample C Female 42.3
Sample D Female 57.3
Hippocampal formation
nTPM: 28.2
Samples: 4

Max nTPM: 29.0
Min nTPM: 27.6
Sample A Male 29.0
Sample B Male 28.2
Sample C Female 27.6
Sample D Female 28.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.1
71307268 Antisense, RP_050825_01_E10, Mouse strain C57BL/6J (56 days, male) 4.1
73512377 Antisense, RP_050825_01_E10, Mouse strain C57BL/6J (56 days, male) 1.3

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