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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
61.3
nTPM
Monaco:
58.8
nTPM
Schmiedel:
45.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
61.3
HPA sample
nTPM
gdT-cell nTPM: 61.3
Samples: 6
Max nTPM: 85.6
Min nTPM: 44.3
P10809_1007
44.3
P10809_1022
74.0
P10809_1041
69.0
P10809_1060
49.0
P10809_1077
45.8
P10809_1098
85.6
MAIT T-cell nTPM: 45.7
Samples: 6
Max nTPM: 56.8
Min nTPM: 30.0
P10809_1006
30.0
P10809_1024
56.0
P10809_1043
56.8
P10809_1062
44.9
P10809_1083
36.5
P10809_1097
50.2
Memory CD4 T-cell nTPM: 42.7
Samples: 6
Max nTPM: 51.8
Min nTPM: 33.3
P10809_1014
36.3
P10809_1026
51.1
P10809_1045
48.4
P10809_1064
33.3
P10809_1086
35.2
P10809_1113
51.8
Memory CD8 T-cell nTPM: 57.2
Samples: 5
Max nTPM: 70.9
Min nTPM: 41.2
P10809_1012
41.2
P10809_1027
62.1
P10809_1046
70.9
P10809_1065
43.5
P10809_1111
68.3
Naive CD4 T-cell nTPM: 43.3
Samples: 6
Max nTPM: 56.7
Min nTPM: 22.9
P10809_1015
27.9
P10809_1030
56.1
P10809_1049
56.7
P10809_1068
22.9
P10809_1085
41.1
P10809_1112
55.2
Naive CD8 T-cell nTPM: 44.4
Samples: 6
Max nTPM: 58.4
Min nTPM: 31.6
P10809_1016
34.0
P10809_1031
42.7
P10809_1050
58.4
P10809_1069
31.6
P10809_1087
48.1
P10809_1110
51.8
T-reg nTPM: 42.4
Samples: 6
Max nTPM: 58.8
Min nTPM: 24.2
P10809_1018
27.4
P10809_1037
58.8
P10809_1056
48.8
P10809_1075
49.4
P10809_1094
24.2
P10809_1106
45.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
58.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 39.9
Samples: 4
Max nTPM: 53.2
Min nTPM: 26.1
RHH5202_R3573
38.3
RHH5230_R3602
53.2
RHH5259_R3631
26.1
RHH5288_R3660
42.1
Effector memory CD8 T-cell nTPM: 52.5
Samples: 4
Max nTPM: 63.5
Min nTPM: 45.9
RHH5203_R3574
52.4
RHH5231_R3603
48.1
RHH5260_R3632
45.9
RHH5289_R3661
63.5
MAIT T-cell nTPM: 41.4
Samples: 4
Max nTPM: 53.5
Min nTPM: 30.8
RHH5233_R3605
39.5
RHH5205_R3576
30.8
RHH5262_R3634
41.8
RHH5297_R3663
53.5
Memory CD4 T-cell TFH nTPM: 52.1
Samples: 4
Max nTPM: 64.9
Min nTPM: 33.1
RHH5300_R3666
54.5
RHH5236_R3608
56.0
RHH5265_R3637
33.1
RHH5208_R3579
64.9
Memory CD4 T-cell Th1 nTPM: 28.8
Samples: 4
Max nTPM: 35.3
Min nTPM: 23.7
RHH5210_R3581
31.5
RHH5302_R3668
35.3
RHH5238_R3610
24.7
RHH5267_R3639
23.7
Memory CD4 T-cell Th1/Th17 nTPM: 42.2
Samples: 4
Max nTPM: 64.7
Min nTPM: 18.6
RHH5303_R3669
64.7
RHH5211_R3582
57.2
RHH5239_R3611
18.6
RHH5268_R3640
28.3
Memory CD4 T-cell Th17 nTPM: 38.4
Samples: 4
Max nTPM: 64.7
Min nTPM: 26.8
RHH5304_R3670
29.6
RHH5212_R3583
64.7
RHH5240_R3612
32.4
RHH5269_R3641
26.8
Memory CD4 T-cell Th2 nTPM: 40.1
Samples: 4
Max nTPM: 43.5
Min nTPM: 36.3
RHH5305_R3671
39.9
RHH5213_R3584
36.3
RHH5241_R3613
43.5
RHH5270_R3642
40.7
Naive CD4 T-cell nTPM: 40.8
Samples: 4
Max nTPM: 51.0
Min nTPM: 23.7
RHH5306_R3672
45.6
RHH5214_R3585
51.0
RHH5242_R3614
42.9
RHH5271_R3643
23.7
Naive CD8 T-cell nTPM: 37.3
Samples: 4
Max nTPM: 46.3
Min nTPM: 24.0
RHH5201_R3572
41.0
RHH5229_R3601
24.0
RHH5258_R3630
46.3
RHH5287_R3659
38.0
Non-Vd2 gdTCR nTPM: 58.8
Samples: 4
Max nTPM: 70.4
Min nTPM: 46.2
RHH5235_R3607
46.2
RHH5264_R3636
65.7
RHH5207_R3578
52.9
RHH5299_R3665
70.4
T-reg nTPM: 41.1
Samples: 4
Max nTPM: 61.7
Min nTPM: 27.8
RHH5301_R3667
44.0
RHH5237_R3609
61.7
RHH5266_R3638
27.8
RHH5209_R3580
30.9
Terminal effector memory CD4 T-cell nTPM: 52.1
Samples: 2
Max nTPM: 54.7
Min nTPM: 49.4
RHH5243_R3615
49.4
RHH5272_R3644
54.7
Terminal effector memory CD8 T-cell nTPM: 55.2
Samples: 4
Max nTPM: 75.2
Min nTPM: 33.9
RHH5232_R3604
54.0
RHH5204_R3575
57.7
RHH5261_R3633
33.9
RHH5296_R3662
75.2
Vd2 gdTCR nTPM: 58.8
Samples: 4
Max nTPM: 73.6
Min nTPM: 44.0
RHH5234_R3606
49.6
RHH5206_R3577
68.1
RHH5263_R3635
44.0
RHH5298_R3664
73.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
