We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
164.5
nTPM
Monaco:
157.8
nTPM
Schmiedel:
114.6
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
164.5
HPA sample
nTPM
gdT-cell nTPM: 21.4
Samples: 6
Max nTPM: 29.6
Min nTPM: 13.2
P10809_1007
20.7
P10809_1022
29.6
P10809_1041
13.2
P10809_1060
19.7
P10809_1077
22.0
P10809_1098
22.9
MAIT T-cell nTPM: 12.8
Samples: 6
Max nTPM: 17.9
Min nTPM: 7.0
P10809_1006
17.8
P10809_1024
7.0
P10809_1043
17.9
P10809_1062
7.5
P10809_1083
14.8
P10809_1097
11.5
Memory CD4 T-cell nTPM: 72.3
Samples: 6
Max nTPM: 101.8
Min nTPM: 49.6
P10809_1014
72.3
P10809_1026
90.1
P10809_1045
101.8
P10809_1064
69.9
P10809_1086
50.3
P10809_1113
49.6
Memory CD8 T-cell nTPM: 44.2
Samples: 5
Max nTPM: 52.8
Min nTPM: 34.2
P10809_1012
39.3
P10809_1027
46.6
P10809_1046
48.0
P10809_1065
34.2
P10809_1111
52.8
Naive CD4 T-cell nTPM: 76.7
Samples: 6
Max nTPM: 107.9
Min nTPM: 59.9
P10809_1015
66.2
P10809_1030
78.6
P10809_1049
107.9
P10809_1068
65.7
P10809_1085
82.1
P10809_1112
59.9
Naive CD8 T-cell nTPM: 54.3
Samples: 6
Max nTPM: 79.1
Min nTPM: 24.3
P10809_1016
55.5
P10809_1031
79.1
P10809_1050
55.3
P10809_1069
51.8
P10809_1087
24.3
P10809_1110
59.6
T-reg nTPM: 164.5
Samples: 6
Max nTPM: 300.6
Min nTPM: 91.2
P10809_1018
91.2
P10809_1037
162.6
P10809_1056
300.6
P10809_1075
182.8
P10809_1094
106.8
P10809_1106
143.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
157.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 89.7
Samples: 4
Max nTPM: 102.8
Min nTPM: 81.2
RHH5202_R3573
81.2
RHH5230_R3602
81.3
RHH5259_R3631
102.8
RHH5288_R3660
93.5
Effector memory CD8 T-cell nTPM: 105.7
Samples: 4
Max nTPM: 159.4
Min nTPM: 52.2
RHH5203_R3574
105.9
RHH5231_R3603
159.4
RHH5260_R3632
105.1
RHH5289_R3661
52.2
MAIT T-cell nTPM: 37.0
Samples: 4
Max nTPM: 42.4
Min nTPM: 30.3
RHH5233_R3605
30.3
RHH5205_R3576
34.9
RHH5262_R3634
42.4
RHH5297_R3663
40.2
Memory CD4 T-cell TFH nTPM: 152.4
Samples: 4
Max nTPM: 231.1
Min nTPM: 80.9
RHH5300_R3666
160.9
RHH5236_R3608
231.1
RHH5265_R3637
136.6
RHH5208_R3579
80.9
Memory CD4 T-cell Th1 nTPM: 113.0
Samples: 4
Max nTPM: 136.2
Min nTPM: 91.5
RHH5210_R3581
94.4
RHH5302_R3668
129.9
RHH5238_R3610
91.5
RHH5267_R3639
136.2
Memory CD4 T-cell Th1/Th17 nTPM: 100.7
Samples: 4
Max nTPM: 153.1
Min nTPM: 56.8
RHH5303_R3669
92.1
RHH5211_R3582
153.1
RHH5239_R3611
56.8
RHH5268_R3640
100.7
Memory CD4 T-cell Th17 nTPM: 80.1
Samples: 4
Max nTPM: 145.6
Min nTPM: 46.9
RHH5304_R3670
56.3
RHH5212_R3583
145.6
RHH5240_R3612
46.9
RHH5269_R3641
71.4
Memory CD4 T-cell Th2 nTPM: 125.9
Samples: 4
Max nTPM: 138.6
Min nTPM: 114.1
RHH5305_R3671
138.6
RHH5213_R3584
114.1
RHH5241_R3613
119.1
RHH5270_R3642
131.7
Naive CD4 T-cell nTPM: 133.8
Samples: 4
Max nTPM: 160.7
Min nTPM: 99.3
RHH5306_R3672
160.7
RHH5214_R3585
157.1
RHH5242_R3614
118.1
RHH5271_R3643
99.3
Naive CD8 T-cell nTPM: 87.9
Samples: 4
Max nTPM: 150.7
Min nTPM: 30.7
RHH5201_R3572
30.7
RHH5229_R3601
81.1
RHH5258_R3630
150.7
RHH5287_R3659
89.2
Non-Vd2 gdTCR nTPM: 61.8
Samples: 4
Max nTPM: 95.0
Min nTPM: 23.6
RHH5235_R3607
66.4
RHH5264_R3636
95.0
RHH5207_R3578
23.6
RHH5299_R3665
62.1
T-reg nTPM: 157.8
Samples: 4
Max nTPM: 194.5
Min nTPM: 119.8
RHH5301_R3667
189.3
RHH5237_R3609
194.5
RHH5266_R3638
119.8
RHH5209_R3580
127.7
Terminal effector memory CD4 T-cell nTPM: 81.8
Samples: 2
Max nTPM: 108.0
Min nTPM: 55.5
RHH5243_R3615
55.5
RHH5272_R3644
108.0
Terminal effector memory CD8 T-cell nTPM: 70.2
Samples: 4
Max nTPM: 83.9
Min nTPM: 55.5
RHH5232_R3604
79.6
RHH5204_R3575
83.9
RHH5261_R3633
61.7
RHH5296_R3662
55.5
Vd2 gdTCR nTPM: 118.4
Samples: 4
Max nTPM: 138.0
Min nTPM: 91.7
RHH5234_R3606
138.0
RHH5206_R3577
91.7
RHH5263_R3635
117.7
RHH5298_R3664
126.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
