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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
509.4
nTPM
Monaco:
2478.2
nTPM
Schmiedel:
606.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
509.4
HPA sample
nTPM
gdT-cell nTPM: 29.2
Samples: 6
Max nTPM: 45.3
Min nTPM: 15.4
P10809_1007
45.3
P10809_1022
34.4
P10809_1041
21.9
P10809_1060
36.0
P10809_1077
22.3
P10809_1098
15.4
MAIT T-cell nTPM: 227.8
Samples: 6
Max nTPM: 279.5
Min nTPM: 176.2
P10809_1006
201.5
P10809_1024
176.2
P10809_1043
204.1
P10809_1062
265.7
P10809_1083
279.5
P10809_1097
240.0
Memory CD4 T-cell nTPM: 2.3
Samples: 6
Max nTPM: 5.3
Min nTPM: 0.3
P10809_1014
2.0
P10809_1026
0.3
P10809_1045
1.9
P10809_1064
3.1
P10809_1086
5.3
P10809_1113
1.1
Memory CD8 T-cell nTPM: 509.4
Samples: 5
Max nTPM: 593.9
Min nTPM: 456.1
P10809_1012
508.8
P10809_1027
486.0
P10809_1046
593.9
P10809_1065
502.1
P10809_1111
456.1
Naive CD4 T-cell nTPM: 2.2
Samples: 6
Max nTPM: 8.3
Min nTPM: 0.4
P10809_1015
0.6
P10809_1030
0.6
P10809_1049
2.2
P10809_1068
1.1
P10809_1085
8.3
P10809_1112
0.4
Naive CD8 T-cell nTPM: 461.5
Samples: 6
Max nTPM: 633.0
Min nTPM: 353.5
P10809_1016
434.2
P10809_1031
417.2
P10809_1050
423.0
P10809_1069
508.3
P10809_1087
633.0
P10809_1110
353.5
T-reg nTPM: 0.8
Samples: 6
Max nTPM: 2.3
Min nTPM: 0.0
P10809_1018
0.0
P10809_1037
0.2
P10809_1056
0.0
P10809_1075
0.4
P10809_1094
2.3
P10809_1106
1.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2478.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1099.8
Samples: 4
Max nTPM: 1363.6
Min nTPM: 955.5
RHH5202_R3573
1363.6
RHH5230_R3602
955.5
RHH5259_R3631
990.9
RHH5288_R3660
1089.0
Effector memory CD8 T-cell nTPM: 2182.1
Samples: 4
Max nTPM: 2398.5
Min nTPM: 1901.3
RHH5203_R3574
2398.5
RHH5231_R3603
2184.8
RHH5260_R3632
1901.3
RHH5289_R3661
2243.9
MAIT T-cell nTPM: 1097.8
Samples: 4
Max nTPM: 1309.9
Min nTPM: 824.3
RHH5233_R3605
1309.9
RHH5205_R3576
1293.9
RHH5262_R3634
963.0
RHH5297_R3663
824.3
Memory CD4 T-cell TFH nTPM: 17.8
Samples: 4
Max nTPM: 27.2
Min nTPM: 10.9
RHH5300_R3666
19.8
RHH5236_R3608
13.1
RHH5265_R3637
10.9
RHH5208_R3579
27.2
Memory CD4 T-cell Th1 nTPM: 33.4
Samples: 4
Max nTPM: 37.9
Min nTPM: 30.1
RHH5210_R3581
32.7
RHH5302_R3668
30.1
RHH5238_R3610
33.0
RHH5267_R3639
37.9
Memory CD4 T-cell Th1/Th17 nTPM: 27.6
Samples: 4
Max nTPM: 35.8
Min nTPM: 22.6
RHH5303_R3669
24.1
RHH5211_R3582
35.8
RHH5239_R3611
22.6
RHH5268_R3640
27.9
Memory CD4 T-cell Th17 nTPM: 38.7
Samples: 4
Max nTPM: 50.2
Min nTPM: 28.6
RHH5304_R3670
50.2
RHH5212_R3583
44.4
RHH5240_R3612
28.6
RHH5269_R3641
31.5
Memory CD4 T-cell Th2 nTPM: 31.0
Samples: 4
Max nTPM: 36.3
Min nTPM: 26.7
RHH5305_R3671
30.4
RHH5213_R3584
30.5
RHH5241_R3613
36.3
RHH5270_R3642
26.7
Naive CD4 T-cell nTPM: 25.8
Samples: 4
Max nTPM: 32.2
Min nTPM: 17.3
RHH5306_R3672
27.4
RHH5214_R3585
32.2
RHH5242_R3614
17.3
RHH5271_R3643
26.2
Naive CD8 T-cell nTPM: 1109.3
Samples: 4
Max nTPM: 1213.7
Min nTPM: 863.2
RHH5201_R3572
1209.8
RHH5229_R3601
863.2
RHH5258_R3630
1150.6
RHH5287_R3659
1213.7
Non-Vd2 gdTCR nTPM: 265.1
Samples: 4
Max nTPM: 457.5
Min nTPM: 134.3
RHH5235_R3607
457.5
RHH5264_R3636
186.3
RHH5207_R3578
134.3
RHH5299_R3665
282.4
T-reg nTPM: 24.7
Samples: 4
Max nTPM: 32.5
Min nTPM: 19.9
RHH5301_R3667
22.7
RHH5237_R3609
23.7
RHH5266_R3638
19.9
RHH5209_R3580
32.5
Terminal effector memory CD4 T-cell nTPM: 102.2
Samples: 2
Max nTPM: 135.4
Min nTPM: 69.0
RHH5243_R3615
135.4
RHH5272_R3644
69.0
Terminal effector memory CD8 T-cell nTPM: 2478.2
Samples: 4
Max nTPM: 2913.4
Min nTPM: 2072.5
RHH5232_R3604
2610.1
RHH5204_R3575
2316.7
RHH5261_R3633
2072.5
RHH5296_R3662
2913.4
Vd2 gdTCR nTPM: 90.1
Samples: 4
Max nTPM: 139.6
Min nTPM: 62.4
RHH5234_R3606
72.8
RHH5206_R3577
85.4
RHH5263_R3635
139.6
RHH5298_R3664
62.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
