HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:9.6 nTPM
HPA Brain:131.3 nTPM
GTEx:9.6 nTPM
FANTOM5:181.6 Scaled Tags Per Million
Pig:100.7 nTPM
Mouse:108.9 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA066710
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 131.3
Sample id Sample description nTPM
Hippocampus
nTPM: 104.3
1855 Male, age 76, left hemisphere 118.6
1898 Male, age 80, left hemisphere 116.3
2621 Female, age 67, right hemisphere 115.7
2148 Female, age 91, left hemisphere 99.0
2529 Female, age 94, left hemisphere 92.5
1911 Female, age 85, right hemisphere 83.9
Dentate gyrus
nTPM: 102.0
2246 Female, age 85, both hemispheres 110.2
1927 Female, age 91, both hemispheres 109.4
2531 Female, age 67, both hemispheres 105.3
2010 Male, age 76, both hemispheres 104.8
2530 Female, age 94, left hemisphere 92.2
2528 Male, age 74, both hemispheres 89.9
Entorhinal gyrus
nTPM: 115.6
2764 Male, age 80, right hemisphere 132.1
2613 Female, age 94, left hemisphere 131.4
1938 Female, age 85, left hemisphere 124.4
1787 Male, age 76, left hemisphere 118.2
2686 Male, age 75, right hemisphere 102.9
2117 Female, age 91, right hemisphere 84.9
Hippocampus, CA1
nTPM: 121.6
2749 Male, age 80, left hemisphere 172.1
2045 Male, age 76, both hemispheres 118.0
2527 Male, age 74, both hemispheres 109.2
2082 Female, age 91, right hemisphere 108.5
1873 Female, age 85, both hemispheres 100.0
Hippocampus, CA2
nTPM: 104.0
1963 Male, age 80, left hemisphere 115.8
1892 Male, age 76, both hemispheres 115.2
1940 Female, age 85, left hemisphere 105.7
2113 Female, age 91, right hemisphere 99.7
2437 Female, age 94, left hemisphere 97.9
2249 Male, age 74, both hemispheres 89.8
Hippocampus, CA3
nTPM: 110.2
2137 Male, age 80, left hemisphere 164.3
2861 Female, age 67, both hemispheres 111.3
2620 Female, age 94, left hemisphere 111.1
1867 Male, age 76, both hemispheres 105.1
2436 Male, age 74, both hemispheres 89.8
1891 Female, age 85, both hemispheres 79.6
Parahippocampal cortex
nTPM: 113.1
2245 Female, age 91, both hemispheres 129.2
1933 Female, age 85, both hemispheres 125.2
2250 Female, age 67, right hemisphere 122.0
1850 Male, age 80, both hemispheres 119.6
2532 Female, age 72, left hemisphere 112.2
2622 Female, age 67, right hemisphere 112.2
2693 Female, age 94, both hemispheres 110.5
2018 Male, age 76, both hemispheres 107.0
1990 Female, age 91, right hemisphere 104.3
2692 Male, age 74, both hemispheres 89.3
Perirhinal gyrus
nTPM: 131.3
1847 Female, age 91, left hemisphere 148.1
2521 Female, age 94, right hemisphere 140.6
1794 Male, age 80, right hemisphere 139.9
1841 Female, age 85, right hemisphere 116.5
2848 Male, age 76, right hemisphere 111.2
Subiculum
nTPM: 98.0
1977 Female, age 85, both hemispheres 118.3
1901 Male, age 80, both hemispheres 109.3
2438 Female, age 94, left hemisphere 99.7
2619 Male, age 74, both hemispheres 92.2
2042 Male, age 76, both hemispheres 88.3
2729 Female, age 91, right hemisphere 79.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.6
Samples: 197

Max nTPM: 41.8
Min nTPM: 1.1
Std nTPM: 6.8
Median nTPM: 7.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 41.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 33.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 32.0
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 30.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 28.6
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 26.2
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 25.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 25.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 24.4
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 24.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 23.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 181.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 181.6
FF:10153-102I9 76 years, female 196.0
FF:10169-103B7 60 years, female 167.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 100.7
Pig sample Sample description nTPM
Subiculum
nTPM: 100.8
Samples: 4

Max nTPM: 131.3
Min nTPM: 80.1
Sample A Female 131.3
Sample B Female 90.1
Sample C Male 101.5
Sample D Male 80.1
Dorsal hippocampus
nTPM: 80.3
Samples: 4

Max nTPM: 92.1
Min nTPM: 61.0
Sample A Female 92.1
Sample B Female 90.8
Sample C Male 77.1
Sample D Male 61.0
Entorhinal cortex
nTPM: 82.2
Samples: 4

Max nTPM: 92.5
Min nTPM: 66.0
Sample A Female 92.0
Sample B Female 66.0
Sample C Male 92.5
Sample D Male 78.4
Ventral hippocampus
nTPM: 87.8
Samples: 4

Max nTPM: 117.3
Min nTPM: 67.2
Sample A Female 85.3
Sample B Female 67.2
Sample C Male 117.3
Sample D Male 81.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 108.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 108.9
Samples: 4

Max nTPM: 143.4
Min nTPM: 92.6
Sample A Male 97.6
Sample B Male 102.0
Sample C Female 92.6
Sample D Female 143.4
Hippocampal formation
nTPM: 93.6
Samples: 4

Max nTPM: 103.4
Min nTPM: 80.7
Sample A Male 80.7
Sample B Male 103.4
Sample C Female 92.6
Sample D Female 97.7

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