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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
123.9
nTPM
FANTOM5:
31.4
Scaled Tags Per Million
Pig:
67.7
nTPM
Allen mouse:
6.2
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
123.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 102.0
1984
Male, age 76, both hemispheres
116.9
2301
Female, age 85, both hemispheres
109.8
2090
Male, age 80, both hemispheres
103.8
2188
Female, age 91, both hemispheres
77.3
Dorsal cochlear nucleus nTPM: 116.9
2058
Male, age 76, both hemispheres
137.5
2378
Male, age 80, both hemispheres
126.2
2802
Male, age 74, right hemisphere
119.8
2370
Male, age 61, both hemispheres
105.9
2187
Female, age 91, both hemispheres
95.2
Dorsal tegmental nucleus nTPM: 123.0
1936
Male, age 76, left hemisphere
138.3
2358
Male, age 61, both hemispheres
129.7
2083
Male, age 80, both hemispheres
116.3
2326
Male, age 74, both hemispheres
107.5
Dorsolateral tegmental area nTPM: 123.3
2141
Male, age 76, both hemispheres
178.6
2360
Male, age 74, both hemispheres
127.0
2751
Female, age 85, both hemispheres
109.7
2337
Male, age 61, both hemispheres
101.4
2654
Male, age 80, both hemispheres
99.9
Kolliker-Fuse nucleus nTPM: 121.7
2315
Male, age 76, right hemisphere
193.3
2163
Male, age 80, both hemispheres
94.6
2793
Female, age 91, left hemisphere
77.3
Lateral lemniscal nuclei nTPM: 84.3
2036
Male, age 80, both hemispheres
99.3
2169
Male, age 76, both hemispheres
86.5
2746
Female, age 85, left hemisphere
82.4
2453
Male, age 74, right hemisphere
79.7
2320
Female, age 91, left hemisphere
73.8
Lateral parabrachial nucleus nTPM: 116.6
2792
Male, age 76, both hemispheres
145.7
2790
Male, age 61, both hemispheres
115.1
2139
Female, age 85, right hemisphere
105.8
2013
Male, age 80, both hemispheres
99.6
Lateral vestibular nucleus nTPM: 114.8
2184
Male, age 76, both hemispheres
117.0
2311
Male, age 80, both hemispheres
112.7
Locus coeruleus nTPM: 113.6
2317
Female, age 72, unknown
125.8
1980
Male, age 76, both hemispheres
123.4
2788
Male, age 74, unknown
117.2
2162
Male, age 80, both hemispheres
110.9
2123
Female, age 91, both hemispheres
110.7
2014
Male, age 55, unknown
108.7
2720
Male, age 74, both hemispheres
98.7
Medial parabrachial nucleus nTPM: 104.4
2786
Male, age 76, both hemispheres
122.5
2854
Male, age 80, both hemispheres
108.2
2156
Male, age 61, both hemispheres
102.3
2463
Female, age 85, right hemisphere
97.7
2170
Female, age 91, both hemispheres
91.5
Medial periolivary nuclei nTPM: 89.6
2171
Female, age 85, both hemispheres
98.3
2791
Male, age 74, right hemisphere
92.9
2458
Female, age 91, both hemispheres
86.3
2081
Male, age 80, both hemispheres
85.8
2063
Male, age 76, both hemispheres
84.7
Motor facial nucleus nTPM: 100.1
2795
Female, age 91, both hemispheres
130.1
2126
Male, age 61, both hemispheres
117.1
2327
Male, age 80, both hemispheres
99.0
2062
Male, age 76, both hemispheres
91.4
2365
Male, age 74, right hemisphere
84.3
2697
Female, age 85, both hemispheres
78.6
Motor trigeminal nucleus nTPM: 88.9
2309
Male, age 76, both hemispheres
108.2
2335
Male, age 61, both hemispheres
96.7
2079
Male, age 80, both hemispheres
93.3
2321
Female, age 91, both hemispheres
81.6
2560
Male, age 74, both hemispheres
64.9
Nuclei of the trapezoid body nTPM: 95.2
2368
Female, age 91, both hemispheres
103.1
2735
Female, age 85, both hemispheres
96.8
2159
Male, age 61, both hemispheres
95.3
2166
Male, age 80, both hemispheres
92.2
1983
Male, age 76, both hemispheres
88.4
Nucleus raphe magnus nTPM: 88.9
2160
Male, age 61, both hemispheres
97.5
2328
Male, age 80, both hemispheres
95.5
2051
Male, age 76, both hemispheres
92.8
2172
Female, age 85, both hemispheres
85.8
2455
Male, age 74, both hemispheres
81.3
2459
Female, age 91, both hemispheres
80.6
Paramedian reticular nucleus nTPM: 101.1
2052
Male, age 76, both hemispheres
114.7
2313
Male, age 61, both hemispheres
102.7
2057
Male, age 80, both hemispheres
99.6
2050
Female, age 85, both hemispheres
87.6
Pedunculopontine tegmental nucleus nTPM: 118.4
1921
Female, age 85, both hemispheres
125.1
2334
Male, age 80, both hemispheres
115.9
2338
Male, age 61, both hemispheres
114.2
Pontine nuclei nTPM: 79.2
2115
Male, age 80, left hemisphere
90.7
1863
Male, age 55, unknown
90.1
2727
Male, age 61, right hemisphere
88.4
2109
Female, age 72, unknown
82.3
1968
Male, age 76, left hemisphere
77.9
2787
Female, age 85, both hemispheres
75.6
2319
Female, age 91, both hemispheres
74.0
2454
Male, age 74, left hemisphere
54.6
Pontine raphe nucleus nTPM: 123.9
2853
Male, age 76, midline
149.1
2122
Female, age 85, midline
98.6
Posteroventral cochlear nucleus nTPM: 103.5
2070
Male, age 76, both hemispheres
125.7
2371
Male, age 61, both hemispheres
119.9
2341
Male, age 80, both hemispheres
103.5
2752
Female, age 85, both hemispheres
91.5
2135
Female, age 91, both hemispheres
76.8
Principal sensory trigeminal nucleus nTPM: 97.9
2324
Male, age 76, both hemispheres
124.2
2008
Male, age 80, left hemisphere
98.5
2158
Male, age 61, both hemispheres
94.7
2367
Female, age 91, left hemisphere
74.1
Reticular pontine nucleus, caudal nTPM: 84.9
2092
Male, age 76, both hemispheres
99.4
2332
Male, age 80, right hemisphere
90.4
2457
Female, age 91, both hemispheres
83.3
2559
Male, age 74, both hemispheres
66.6
Reticular pontine nucleus, oral nTPM: 99.8
1939
Male, age 80, both hemispheres
125.4
2167
Male, age 76, both hemispheres
124.9
2012
Female, age 85, both hemispheres
100.8
2366
Female, age 91, both hemispheres
81.5
2361
Male, age 74, both hemispheres
66.3
Reticulotegmental nucleus nTPM: 110.7
2333
Male, age 80, both hemispheres
126.6
2325
Male, age 76, both hemispheres
122.4
2322
Female, age 91, both hemispheres
106.4
2452
Male, age 74, both hemispheres
87.6
Spinal trigeminal nucleus, oral nTPM: 102.7
2164
Male, age 80, both hemispheres
111.1
1978
Male, age 76, both hemispheres
98.5
2737
Female, age 85, both hemispheres
98.5
Subcoeruleus area nTPM: 101.6
2369
Female, age 85, left hemisphere
109.4
2323
Female, age 91, left hemisphere
104.3
2089
Male, age 76, left hemisphere
102.1
1958
Male, age 80, both hemispheres
101.1
2451
Male, age 74, both hemispheres
91.1
Superior olive nTPM: 84.8
2329
Male, age 80, right hemisphere
95.6
2020
Male, age 76, both hemispheres
88.7
2364
Male, age 74, right hemisphere
85.8
1875
Female, age 85, both hemispheres
81.3
2561
Female, age 91, both hemispheres
72.5
Ventral periolivary nuclei nTPM: 93.7
2130
Female, age 85, both hemispheres
108.0
2165
Male, age 80, both hemispheres
100.7
2023
Male, age 76, both hemispheres
89.9
2794
Female, age 91, left hemisphere
76.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 97.6
2359
Male, age 61, both hemispheres
112.1
2840
Female, age 85, both hemispheres
104.3
1959
Male, age 76, both hemispheres
102.5
2161
Male, age 80, both hemispheres
97.1
2456
Female, age 91, both hemispheres
94.3
2449
Male, age 74, both hemispheres
75.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
67.7
Pig sample
Sample description
nTPM
Pons nTPM: 67.6
Samples: 4
Max nTPM: 78.2
Min nTPM: 56.8
Sample A
Female
56.8
Sample B
Female
78.2
Sample C
Male
61.2
Sample D
Male
74.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
