HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:6.0 nTPM
HPA Brain:17.9 nTPM
GTEx:6.0 nTPM
FANTOM5:31.9 Scaled Tags Per Million
Pig:5.8 nTPM
Mouse:47.9 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.9
Sample id Sample description nTPM
Hippocampus
nTPM: 15.5
1898 Male, age 80, left hemisphere 16.7
2148 Female, age 91, left hemisphere 16.2
2621 Female, age 67, right hemisphere 16.2
1911 Female, age 85, right hemisphere 15.8
1855 Male, age 76, left hemisphere 15.6
2529 Female, age 94, left hemisphere 12.4
Dentate gyrus
nTPM: 17.5
1927 Female, age 91, both hemispheres 22.9
2528 Male, age 74, both hemispheres 18.6
2530 Female, age 94, left hemisphere 17.3
2010 Male, age 76, both hemispheres 16.8
2246 Female, age 85, both hemispheres 16.6
2531 Female, age 67, both hemispheres 13.1
Entorhinal gyrus
nTPM: 14.4
2613 Female, age 94, left hemisphere 15.7
1938 Female, age 85, left hemisphere 15.4
2764 Male, age 80, right hemisphere 15.1
1787 Male, age 76, left hemisphere 14.5
2686 Male, age 75, right hemisphere 13.9
2117 Female, age 91, right hemisphere 11.6
Hippocampus, CA1
nTPM: 16.9
2749 Male, age 80, left hemisphere 18.5
2527 Male, age 74, both hemispheres 17.8
1873 Female, age 85, both hemispheres 17.5
2045 Male, age 76, both hemispheres 16.9
2082 Female, age 91, right hemisphere 13.9
Hippocampus, CA2
nTPM: 16.8
1892 Male, age 76, both hemispheres 21.1
2249 Male, age 74, both hemispheres 17.2
2437 Female, age 94, left hemisphere 16.6
1963 Male, age 80, left hemisphere 15.8
1940 Female, age 85, left hemisphere 15.6
2113 Female, age 91, right hemisphere 14.6
Hippocampus, CA3
nTPM: 15.6
1867 Male, age 76, both hemispheres 16.8
2620 Female, age 94, left hemisphere 16.8
2436 Male, age 74, both hemispheres 16.4
2137 Male, age 80, left hemisphere 15.8
1891 Female, age 85, both hemispheres 14.9
2861 Female, age 67, both hemispheres 12.9
Parahippocampal cortex
nTPM: 16.5
2693 Female, age 94, both hemispheres 20.5
2250 Female, age 67, right hemisphere 17.6
1990 Female, age 91, right hemisphere 17.5
1850 Male, age 80, both hemispheres 17.0
2245 Female, age 91, both hemispheres 16.8
2622 Female, age 67, right hemisphere 16.0
1933 Female, age 85, both hemispheres 15.4
2018 Male, age 76, both hemispheres 14.8
2532 Female, age 72, left hemisphere 14.8
2692 Male, age 74, both hemispheres 14.2
Perirhinal gyrus
nTPM: 17.9
1794 Male, age 80, right hemisphere 18.7
1841 Female, age 85, right hemisphere 18.6
1847 Female, age 91, left hemisphere 17.8
2521 Female, age 94, right hemisphere 17.8
2848 Male, age 76, right hemisphere 16.8
Subiculum
nTPM: 14.7
1901 Male, age 80, both hemispheres 17.0
2619 Male, age 74, both hemispheres 15.7
2729 Female, age 91, right hemisphere 15.0
1977 Female, age 85, both hemispheres 14.6
2042 Male, age 76, both hemispheres 13.1
2438 Female, age 94, left hemisphere 12.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.0
Samples: 197

Max nTPM: 14.5
Min nTPM: 1.3
Std nTPM: 2.6
Median nTPM: 5.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 14.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 12.6
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 12.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 12.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 12.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 11.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 11.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 11.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 11.4
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 11.4
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 11.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.9
FF:10169-103B7 60 years, female 37.3
FF:10153-102I9 76 years, female 26.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.8
Pig sample Sample description nTPM
Subiculum
nTPM: 5.2
Samples: 4

Max nTPM: 6.8
Min nTPM: 4.5
Sample A Female 6.8
Sample B Female 4.9
Sample C Male 4.7
Sample D Male 4.5
Dorsal hippocampus
nTPM: 5.8
Samples: 4

Max nTPM: 8.8
Min nTPM: 3.6
Sample A Female 8.8
Sample B Female 5.6
Sample C Male 3.6
Sample D Male 5.2
Entorhinal cortex
nTPM: 4.5
Samples: 4

Max nTPM: 6.1
Min nTPM: 3.5
Sample A Female 3.5
Sample B Female 6.1
Sample C Male 4.3
Sample D Male 4.2
Ventral hippocampus
nTPM: 4.5
Samples: 4

Max nTPM: 6.4
Min nTPM: 3.6
Sample A Female 3.6
Sample B Female 4.1
Sample C Male 3.8
Sample D Male 6.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 47.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.3
Samples: 4

Max nTPM: 40.3
Min nTPM: 38.3
Sample A Male 38.3
Sample B Male 38.3
Sample C Female 40.3
Sample D Female 40.1
Hippocampal formation
nTPM: 47.9
Samples: 4

Max nTPM: 53.0
Min nTPM: 43.9
Sample A Male 45.9
Sample B Male 48.7
Sample C Female 53.0
Sample D Female 43.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
70429507 Antisense, RP_050614_01_G12, Mouse strain C57BL/6J (56 days, male) 1.3

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