HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:15.2 nTPM
HPA Brain:17.2 nTPM
GTEx:15.2 nTPM
FANTOM5:35.0 Scaled Tags Per Million
Pig:13.8 nTPM
Mouse:65.5 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031824
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.2
Sample id Sample description nTPM
Hippocampus
nTPM: 14.0
1898 Male, age 80, left hemisphere 16.3
2148 Female, age 91, left hemisphere 13.6
2621 Female, age 67, right hemisphere 13.6
1855 Male, age 76, left hemisphere 13.5
2529 Female, age 94, left hemisphere 13.5
1911 Female, age 85, right hemisphere 13.3
Dentate gyrus
nTPM: 15.5
1927 Female, age 91, both hemispheres 17.6
2010 Male, age 76, both hemispheres 16.9
2531 Female, age 67, both hemispheres 16.3
2246 Female, age 85, both hemispheres 15.5
2528 Male, age 74, both hemispheres 13.9
2530 Female, age 94, left hemisphere 12.7
Entorhinal gyrus
nTPM: 14.4
1938 Female, age 85, left hemisphere 16.9
2764 Male, age 80, right hemisphere 15.5
2613 Female, age 94, left hemisphere 15.0
1787 Male, age 76, left hemisphere 14.0
2686 Male, age 75, right hemisphere 13.2
2117 Female, age 91, right hemisphere 11.9
Hippocampus, CA1
nTPM: 15.4
2045 Male, age 76, both hemispheres 18.1
1873 Female, age 85, both hemispheres 15.8
2749 Male, age 80, left hemisphere 15.4
2082 Female, age 91, right hemisphere 14.2
2527 Male, age 74, both hemispheres 13.7
Hippocampus, CA2
nTPM: 14.5
2437 Female, age 94, left hemisphere 16.6
1892 Male, age 76, both hemispheres 16.3
1940 Female, age 85, left hemisphere 14.6
2113 Female, age 91, right hemisphere 13.9
1963 Male, age 80, left hemisphere 12.8
2249 Male, age 74, both hemispheres 12.6
Hippocampus, CA3
nTPM: 15.1
2137 Male, age 80, left hemisphere 16.4
2620 Female, age 94, left hemisphere 15.9
2436 Male, age 74, both hemispheres 15.8
2861 Female, age 67, both hemispheres 14.3
1867 Male, age 76, both hemispheres 14.2
1891 Female, age 85, both hemispheres 13.7
Parahippocampal cortex
nTPM: 15.6
1990 Female, age 91, right hemisphere 17.3
2250 Female, age 67, right hemisphere 16.5
2018 Male, age 76, both hemispheres 16.4
1933 Female, age 85, both hemispheres 16.3
2245 Female, age 91, both hemispheres 16.2
1850 Male, age 80, both hemispheres 16.1
2693 Female, age 94, both hemispheres 15.6
2532 Female, age 72, left hemisphere 14.2
2692 Male, age 74, both hemispheres 14.0
2622 Female, age 67, right hemisphere 13.1
Perirhinal gyrus
nTPM: 17.2
1847 Female, age 91, left hemisphere 20.0
1841 Female, age 85, right hemisphere 17.1
2521 Female, age 94, right hemisphere 17.1
1794 Male, age 80, right hemisphere 16.7
2848 Male, age 76, right hemisphere 15.3
Subiculum
nTPM: 13.9
1977 Female, age 85, both hemispheres 15.9
2438 Female, age 94, left hemisphere 15.3
1901 Male, age 80, both hemispheres 14.0
2042 Male, age 76, both hemispheres 13.9
2619 Male, age 74, both hemispheres 12.3
2729 Female, age 91, right hemisphere 12.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.2
Samples: 197

Max nTPM: 37.8
Min nTPM: 4.5
Std nTPM: 5.3
Median nTPM: 14.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 37.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 36.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 29.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 27.8
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 27.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 27.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 26.6
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 25.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 25.1
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 24.0
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 23.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.0
FF:10169-103B7 60 years, female 39.4
FF:10153-102I9 76 years, female 30.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.8
Pig sample Sample description nTPM
Subiculum
nTPM: 13.0
Samples: 4

Max nTPM: 14.8
Min nTPM: 11.0
Sample A Female 11.0
Sample B Female 13.4
Sample C Male 12.8
Sample D Male 14.8
Dorsal hippocampus
nTPM: 12.4
Samples: 4

Max nTPM: 12.8
Min nTPM: 11.7
Sample A Female 11.7
Sample B Female 12.8
Sample C Male 12.3
Sample D Male 12.8
Entorhinal cortex
nTPM: 13.8
Samples: 4

Max nTPM: 15.5
Min nTPM: 13.0
Sample A Female 13.0
Sample B Female 13.4
Sample C Male 13.3
Sample D Male 15.5
Ventral hippocampus
nTPM: 13.1
Samples: 4

Max nTPM: 13.9
Min nTPM: 12.3
Sample A Female 13.9
Sample B Female 13.7
Sample C Male 12.4
Sample D Male 12.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 61.5
Samples: 4

Max nTPM: 65.0
Min nTPM: 56.4
Sample A Male 56.4
Sample B Male 65.0
Sample C Female 60.6
Sample D Female 64.0
Hippocampal formation
nTPM: 65.5
Samples: 4

Max nTPM: 79.5
Min nTPM: 57.2
Sample A Male 79.5
Sample B Male 57.2
Sample C Female 65.4
Sample D Female 59.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68441574 Antisense, RP_041214_02_F03, Mouse strain C57BL/6J (56 days, male) 0.1

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