HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:125.0 nTPM
HPA Brain:154.8 nTPM
GTEx:125.0 nTPM
FANTOM5:54.2 Scaled Tags Per Million
Mouse:66.4 nTPM
Allen mouse:6.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 154.8
Sample id Sample description nTPM
Hippocampus
nTPM: 154.8
2621 Female, age 67, right hemisphere 222.2
2529 Female, age 94, left hemisphere 172.3
2148 Female, age 91, left hemisphere 156.5
1911 Female, age 85, right hemisphere 154.8
1898 Male, age 80, left hemisphere 115.3
1855 Male, age 76, left hemisphere 107.6
Dentate gyrus
nTPM: 129.5
2531 Female, age 67, both hemispheres 183.2
1927 Female, age 91, both hemispheres 179.3
2530 Female, age 94, left hemisphere 120.8
2528 Male, age 74, both hemispheres 104.9
2010 Male, age 76, both hemispheres 98.2
2246 Female, age 85, both hemispheres 90.4
Entorhinal gyrus
nTPM: 114.5
2613 Female, age 94, left hemisphere 166.1
2686 Male, age 75, right hemisphere 129.3
2764 Male, age 80, right hemisphere 103.3
1938 Female, age 85, left hemisphere 100.6
1787 Male, age 76, left hemisphere 98.7
2117 Female, age 91, right hemisphere 88.8
Hippocampus, CA1
nTPM: 142.9
2749 Male, age 80, left hemisphere 224.7
2527 Male, age 74, both hemispheres 168.8
2082 Female, age 91, right hemisphere 121.1
1873 Female, age 85, both hemispheres 118.7
2045 Male, age 76, both hemispheres 80.9
Hippocampus, CA2
nTPM: 131.4
1963 Male, age 80, left hemisphere 224.6
2113 Female, age 91, right hemisphere 146.0
2437 Female, age 94, left hemisphere 119.5
1892 Male, age 76, both hemispheres 116.4
2249 Male, age 74, both hemispheres 109.1
1940 Female, age 85, left hemisphere 72.9
Hippocampus, CA3
nTPM: 151.8
2137 Male, age 80, left hemisphere 230.4
2861 Female, age 67, both hemispheres 197.7
2620 Female, age 94, left hemisphere 174.6
1867 Male, age 76, both hemispheres 107.0
2436 Male, age 74, both hemispheres 106.7
1891 Female, age 85, both hemispheres 94.3
Parahippocampal cortex
nTPM: 113.2
2245 Female, age 91, both hemispheres 195.4
2622 Female, age 67, right hemisphere 139.5
2250 Female, age 67, right hemisphere 111.4
2693 Female, age 94, both hemispheres 108.6
1990 Female, age 91, right hemisphere 102.6
2018 Male, age 76, both hemispheres 98.2
2692 Male, age 74, both hemispheres 97.5
2532 Female, age 72, left hemisphere 94.9
1850 Male, age 80, both hemispheres 92.1
1933 Female, age 85, both hemispheres 91.8
Perirhinal gyrus
nTPM: 108.3
1847 Female, age 91, left hemisphere 133.2
2521 Female, age 94, right hemisphere 121.1
1794 Male, age 80, right hemisphere 103.0
1841 Female, age 85, right hemisphere 97.8
2848 Male, age 76, right hemisphere 86.4
Subiculum
nTPM: 99.8
1901 Male, age 80, both hemispheres 110.4
2438 Female, age 94, left hemisphere 106.5
2729 Female, age 91, right hemisphere 97.9
2042 Male, age 76, both hemispheres 97.7
2619 Male, age 74, both hemispheres 95.9
1977 Female, age 85, both hemispheres 90.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 125.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 125.0
Samples: 197

Max nTPM: 554.8
Min nTPM: 4.0
Std nTPM: 81.5
Median nTPM: 112.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 554.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 387.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 365.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 348.7
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 341.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 331.0
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 329.4
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 309.5
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 308.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 270.0
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 266.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 54.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 54.2
FF:10169-103B7 60 years, female 58.1
FF:10153-102I9 76 years, female 50.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 66.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 60.4
Samples: 4

Max nTPM: 69.8
Min nTPM: 52.1
Sample A Male 69.8
Sample B Male 66.1
Sample C Female 53.7
Sample D Female 52.1
Hippocampal formation
nTPM: 66.4
Samples: 4

Max nTPM: 71.9
Min nTPM: 61.4
Sample A Male 61.4
Sample B Male 71.9
Sample C Female 66.9
Sample D Female 65.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.1
69735670 Antisense, RP_050503_03_C06, Mouse strain C57BL/6J (56 days, male) 6.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org